RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 CHERPQ8IWX8 916 aaKnown RBP10.21□□□□□ -0.78
USP3-218ENST00000560202 SCAIQ8N9R8 606 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 PFN4Q8NHR9 129 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 FAM46AQ96IP4 442 aaKnown RBP10.21□□□□□ -0.78
USP3-218ENST00000560202 DSN1Q9H410 356 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 C12orf10Q9HB07 376 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 PROK2Q9HC23 129 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 MEPEQ9NQ76 525 aaPredicted RBP10.21□□□□□ -0.78
USP3-218ENST00000560202 PLSCR2Q9NRY7 297 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 TAS2R10Q9NYW0 307 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 REV1Q9UBZ9 1251 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 ENOPH1Q9UHY7 261 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 HRH3Q9Y5N1 445 aa10.21□□□□□ -0.78
USP3-218ENST00000560202 EXPH5Q8NEV8 1989 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 DCHS1Q96JQ0 3298 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 A0A087WXM4 84 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 A6NL46 340 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 ELOA3DA6NLF2 546 aaPredicted RBP10.2□□□□□ -0.78
USP3-218ENST00000560202 KPNA4O00629 521 aaPredicted RBP10.2□□□□□ -0.78
USP3-218ENST00000560202 EFSO43281 561 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 CDC40O60508 579 aaKnown RBP eCLIP10.2□□□□□ -0.78
USP3-218ENST00000560202 CLIC3O95833 236 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 P04436 131 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 GNAO1P09471 354 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 IFI30P13284 250 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 OSMP13725 252 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 GSTM3P21266 225 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 FPR3P25089 353 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 EPHA2P29317 976 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 CD96P40200 585 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 CASRP41180 1078 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 GSSP48637 474 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 TSPAN31Q12999 210 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 RAPSNQ13702 412 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 TUBA3CQ13748 450 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 BCL2A1Q16548 175 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 ELOA3BQ3SY89 546 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 ZBED5Q49AG3 693 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 AGAP7PQ5VUJ5 663 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 TUBA3EQ6PEY2 450 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 LINC00696Q6ZRV3 163 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 USP51Q70EK9 711 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 FADS6Q8N9I5 356 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 WDSUB1Q8N9V3 476 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 ELOA3Q8NG57 546 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 OR2M3Q8NG83 312 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 SNIP1Q8TAD8 396 aaKnown RBP10.2□□□□□ -0.78
USP3-218ENST00000560202 TMEM234Q8WY98 164 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 AGAP4Q96P64 663 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 UTP23Q9BRU9 249 aaKnown RBP10.2□□□□□ -0.78
USP3-218ENST00000560202 DPH1Q9BZG8 443 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 SACM1LQ9NTJ5 587 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 C20orf141Q9NUB4 165 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 GPR83Q9NYM4 423 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 LRFN1Q9P244 771 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 OSGIN1Q9UJX0 560 aa10.2□□□□□ -0.78
USP3-218ENST00000560202 AKAP13Q12802 2813 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 HTR3EA5X5Y0 456 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 E9PQ18 207 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 G3V3Y1 287 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 CDK2AP1O14519 115 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 BCKDKO14874 412 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 KLF4O43474 513 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 SNX4O95219 450 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 WDPCPO95876 746 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 F10P00742 488 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ATP6V1B1P15313 513 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ZNF24P17028 368 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 PRKCAP17252 672 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 MYF6P23409 242 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 CXCR1P25024 350 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 PCSK6P29122 969 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 GPR4P46093 362 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 CRISP1P54107 249 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 CTBP2P56545 445 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ALDH6A1Q02252 535 aaKnown RBP10.19□□□□□ -0.78
USP3-218ENST00000560202 KEAP1Q14145 624 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 DEFB109BQ30KR1 87 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 SPINK14Q6IE38 97 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ARSKQ6UWY0 536 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ISLR2Q6UXK2 745 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 TMPRSS11FQ6ZWK6 438 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 GRINAQ7Z429 371 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 GPR141Q7Z602 305 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 PLCZ1Q86YW0 608 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 P3H2Q8IVL5 708 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 CDK20Q8IZL9 346 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 PSD4Q8NDX1 1056 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 OR4K17Q8NGC6 315 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 ST8SIA1Q92185 356 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 BPIFA2Q96DR5 249 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 TMEM41AQ96HV5 264 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 MUS81Q96NY9 551 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 SLC19A3Q9BZV2 496 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 TMEM165Q9HC07 324 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 MED17Q9NVC6 651 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 FBXL2Q9UKC9 423 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 TMEM5Q9Y2B1 443 aa10.19□□□□□ -0.78
USP3-218ENST00000560202 IGKV1D-42A0A075B6H8 117 aa10.18□□□□□ -0.78
USP3-218ENST00000560202 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms