RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 RPS5P46782 204 aaKnown RBP13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 TBPL1P62380 186 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 PLAG1Q6DJT9 500 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 PRICKLE2Q7Z3G6 844 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 FBXL18Q96ME1 805 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 FEVQ99581 238 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 NMES1Q9C002 83 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 ADAMTS6Q9UKP5 1117 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 FAM163BP0C2L3 166 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 ZNF33BQ06732 778 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 SERTAD2Q14140 314 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 LTC4SQ16873 150 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 NRMQ8IXM6 262 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 ENTHD1Q8IYW4 607 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 YIPF1Q9Y548 306 aa13.02□□□□□ -0.32
CSPG4P12-202ENST00000559989 OR6C68A6NDL8 312 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SULT1C4O75897 302 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ITGB8P26012 769 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 MEOX1P50221 254 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ALKAL2Q6UX46 152 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 CPXM2Q8N436 756 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR10Z1Q8NGY1 313 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLEC4CQ8WTT0 213 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 UNC13AQ9UPW8 1703 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 AQP7O14520 342 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SORBS2O94875 1100 aaKnown RBP13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 OPCMLQ14982 345 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 C6orf89Q6UWU4 347 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC46A3Q7Z3Q1 461 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ARHGDIGQ99819 225 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 EVA1AQ9H8M9 152 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SEMA4GQ9NTN9 838 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLDND1Q9NY35 253 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 WIF1Q9Y5W5 379 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 LOXHD1Q8IVV2 1947 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR2J3O76001 311 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 CNIH1O95406 144 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 HLA-FP30511 346 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 PLAC9Q5JTB6 97 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SYT13Q7L8C5 426 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 HMGN2P46Q86SG4 172 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 MED30Q96HR3 178 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC16A6O15403 523 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ARG2P78540 354 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZMYND19Q96E35 227 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 NKX6-2Q9C056 277 aaPredicted RBP13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAB18Q9NP72 206 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF337Q9Y3M9 751 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 URGCP-MRPS24S4R325 110 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADGRB3O60242 1522 aa13.02□□□□□ -0.33
CSPG4P12-202ENST00000559989 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 NKX6-3A6NJ46 265 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 NUDT19A8MXV4 375 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 TIMM8AO60220 97 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 EMP2P54851 167 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RELL2Q8NC24 303 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ERVMER34-1Q9H9K5 563 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 BARX1Q9HBU1 254 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 MYOCOSA0A1B0GUC4 107 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 FOXE1O00358 373 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR5H6Q8NGV6 325 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 PEX11GQ96HA9 241 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM175Q9BSA9 504 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 SMOC2Q9H3U7 446 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RARRES3Q9UL19 164 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 FZD7O75084 574 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 GSRP00390 522 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ACKR3P25106 362 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 UBE2IP63279 158 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR7A5Q15622 319 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 KCTD11Q693B1 232 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 VWA1Q6PCB0 445 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 DPH1Q9BZG8 443 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 PISDQ9UG56 409 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF587BE7ETH6 402 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 GAB1Q13480 694 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 C11orf42Q8N5U0 333 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RANGRFQ9HD47 186 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 HHLA2Q9UM44 414 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RGS11O94810 467 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 ENPP1P22413 925 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 LCN6P62502 163 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAB40BQ12829 278 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 PAFAH1B3Q15102 231 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 TXNDC8Q6A555 127 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR5M8Q8NGP6 311 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 SFXN2Q96NB2 322 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 METTL17Q9H7H0 456 aaPredicted RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 TAF9BQ9HBM6 251 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 KDM6BO15054 1643 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 G3V3Q6 166 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 AP1G1O43747 822 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RPL17P18621 184 aaKnown RBP13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 RABGGTBP53611 331 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 FKBP1BP68106 108 aa13.01□□□□□ -0.33
CSPG4P12-202ENST00000559989 PDE7AQ13946 482 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms