RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 YOD1Q5VVQ6 348 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-212ENST00000559937 HBMQ6B0K9 141 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 WBP2NLQ6ICG8 309 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 DPY19L2P2Q6ZN68 376 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 TMEM91Q6ZNR0 172 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 GATAD2AQ86YP4 633 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 RAB43Q86YS6 212 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 UBQLNLQ8IYU4 475 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 MS4A15Q8N5U1 240 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ZFP41Q8N8Y5 198 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SYT14Q8NB59 555 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 OR51Q1Q8NH59 317 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 OR5W2Q8NH69 310 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 NACC2Q96BF6 587 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 OTULINQ96BN8 352 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 C3orf49Q96BT1 292 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 MMABQ96EY8 250 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ZC3HAV1LQ96H79 300 aaKnown RBP7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ART5Q96L15 291 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 PTCHD1Q96NR3 888 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ERMAPQ96PL5 475 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-212ENST00000559937 TNFRSF13CQ96RJ3 184 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 UBL7Q96S82 380 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-212ENST00000559937 TIMP4Q99727 224 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ATF6BQ99941 703 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 TMED9Q9BVK6 235 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 HCAR1Q9BXC0 346 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 MFRPQ9BY79 579 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 RBCK1Q9BYM8 510 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 TPSD1Q9BZJ3 242 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SLC22A4Q9H015 551 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 RNF32Q9H0A6 362 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.43□□□□□ -1.221e-6■■□□□ 14.2
SMAD3-212ENST00000559937 PPP1R3EQ9H7J1 279 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 MED20Q9H944 212 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 UBQLN4Q9NRR5 601 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 LANCL2Q9NS86 450 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 C14orf119Q9NWQ9 140 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SOHLH2Q9NX45 425 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SEMA5BQ9P283 1151 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 DTX4Q9Y2E6 619 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF337Q9Y3M9 751 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SLCO1B1Q9Y6L6 691 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 SPTBP11277 2137 aa7.43□□□□□ -1.22
SMAD3-212ENST00000559937 IGKV3D-11A0A0A0MRZ8 115 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 FRG2CA6NGY1 282 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 HRKO00198 91 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OGG1O15527 345 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 ADAM11O75078 769 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 TMEM127O75204 238 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 SC5DO75845 299 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 IFNA16P05015 189 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 NGFRP08138 427 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 CSF3P09919 207 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR2T7P0C7T2 308 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 IL9P15248 144 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 MYL9P24844 172 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 SLC6A8P48029 635 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 RFX2P48378 723 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 RFX3P48380 749 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 TMED10P49755 219 aaKnown RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 TPTEP56180 551 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 NRG3P56975 720 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 SLC37A1P57057 533 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR2B6P58173 313 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 PRPS1P60891 318 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 RPS7P62081 194 aaKnown RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 MAT1AQ00266 395 aaKnown RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF85Q03923 595 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 COL9A2Q14055 689 aaPredicted RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 BAK1Q16611 211 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 CDONQ4KMG0 1287 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 PYDC2Q56P42 97 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 ZMAT1Q5H9K5 638 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 HACD4Q5VWC8 232 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 DMKNQ6E0U4 476 aaPredicted RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 ZC3H14Q6PJT7 736 aaKnown RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 ZNF517Q6ZMY9 492 aaPredicted RBP7.42□□□□□ -1.22
SMAD3-212ENST00000559937 PXKQ7Z7A4 578 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 KMT5CQ86Y97 462 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 RDH10Q8IZV5 341 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 SHISA5Q8N114 240 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 CADM2Q8N3J6 435 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 CAMKK1Q8N5S9 505 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 FRMD1Q8N878 549 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR10H4Q8NGA5 316 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR4N2Q8NGD1 307 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR5M3Q8NGP4 307 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR2T27Q8NH04 317 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 OR51A7Q8NH64 312 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 HAVCR2Q8TDQ0 301 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 RLN3Q8WXF3 142 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 SMPDL3BQ92485 455 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 PHYHIPQ92561 330 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 TP53INP1Q96A56 240 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 DEPDC7Q96QD5 511 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 TTYH2Q9BSA4 534 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 HDHD5Q9BXW7 423 aa7.42□□□□□ -1.22
SMAD3-212ENST00000559937 NMNAT2Q9BZQ4 307 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms