RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 HDGFL3Q9Y3E1 203 aa8.08□□□□□ -1.12
HDDC3-204ENST00000559834 SLC25A15Q9Y619 301 aa8.08□□□□□ -1.12
HDDC3-204ENST00000559834 TLDC2A0PJX2 215 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 H7C417 338 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 M0R1B8 84 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 PHF1O43189 567 aaPredicted RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 EIF1BO60739 113 aaKnown RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 UGT2B17O75795 530 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 IGHV3-9P01782 118 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 USF1P22415 310 aaPredicted RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 EDNRAP25101 427 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 THBS2P35442 1172 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 HTR3AP46098 478 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 EFNA4P52798 201 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 CASP9P55211 416 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 CLDN8P56748 225 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 EMX2Q04743 252 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 XKR7Q5GH72 579 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 ABLIM2Q6H8Q1 611 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 C11orf71Q6IPW1 123 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 GRINAQ7Z429 371 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 RIMKLAQ8IXN7 391 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 KRTCAP2Q8N6L1 136 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 AGR3Q8TD06 166 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 EPS8L3Q8TE67 593 aaKnown RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 XAGE5Q8WWM1 108 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 PMM1Q92871 262 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 APOPT1Q96IL0 206 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 C3orf30Q96M34 536 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 NAA11Q9BSU3 229 aaPredicted RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 C1orf50Q9BV19 199 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 ZNF350Q9GZX5 532 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.07□□□□□ -1.12
HDDC3-204ENST00000559834 MKS1Q9NXB0 559 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 UPB1Q9UBR1 384 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 TRAPPC4Q9Y296 219 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 ATP23Q9Y6H3 246 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 CR1P17927 2039 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 FBN3Q75N90 2809 aa8.07□□□□□ -1.12
HDDC3-204ENST00000559834 ZNF716A6NP11 495 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 RNASET2O00584 256 aaKnown RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 F12P00748 615 aaPredicted RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 G6PDP11413 515 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 UQCRC2P22695 453 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 PAX7P23759 505 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 APOBEC3AP31941 199 aaPredicted RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 RYKP34925 604 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 PGM1P36871 562 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 GZMKP49863 264 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 MAP2K6P52564 334 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 SLC16A1P53985 500 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 OR2B6P58173 313 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 PRPS1P60891 318 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 RPS26P62854 115 aaKnown RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 SLC35A1P78382 337 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 KCNJ10P78508 379 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 LSM11P83369 360 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 GABRA6Q16445 453 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 SMU1Q2TAY7 513 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 ANXA8L1Q5VT79 327 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 AP1ARQ63HQ0 302 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 ADGRG3Q86Y34 549 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 C17orf78Q8N4C9 275 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 ARFGAP2Q8N6H7 521 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 ZNF525Q8N782 197 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 C1orf162Q8NEQ5 155 aaPredicted RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 MIPOL1Q8TD10 442 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 C10orf105Q8TEF2 133 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 DDIT4LQ96D03 193 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 SLC35G5Q96KT7 338 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 CCDC106Q9BWC9 280 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 C1QTNF6Q9BXI9 259 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 OR51I1Q9H343 314 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 CTPS2Q9NRF8 586 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 NOP53Q9NZM5 478 aaKnown RBP8.06□□□□□ -1.12
HDDC3-204ENST00000559834 TMEM181Q9P2C4 612 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 MALT1Q9UDY8 824 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 KCNE5Q9UJ90 142 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 DCTN4Q9UJW0 460 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 AMDHD2Q9Y303 409 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 WDR45Q9Y484 360 aa8.06□□□□□ -1.12
HDDC3-204ENST00000559834 A0A096LNT2 108 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 RNF103-CHMP3A0A140T963 221 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 PRSS51A0A1B0GVH4 220 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 A0A1W2PR80 420 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 KIAA0513O60268 411 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 LMX1BO60663 402 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 SKAP2O75563 359 aaPredicted RBP8.05□□□□□ -1.12
HDDC3-204ENST00000559834 WNT11O96014 354 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 NUDT17P0C025 328 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 OR12D1P0DN82 309 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 IDH2P48735 452 aaKnown RBP8.05□□□□□ -1.12
HDDC3-204ENST00000559834 PDLIM4P50479 330 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 HPCAP84074 193 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 H3F3AP84243 136 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 OR4F3Q6IEY1 312 aa8.05□□□□□ -1.12
HDDC3-204ENST00000559834 KLHL24Q6TFL4 600 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms