RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 NTF4P34130 210 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 SFTPDP35247 375 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 ACVR1BP36896 505 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CDKN1AP38936 164 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CLK3P49761 638 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 GTF2A1P52655 376 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 PRKAG1P54619 331 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PSMD4P55036 377 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 CTBP2P56545 445 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 BSPH1Q075Z2 132 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 STX3Q13277 289 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PCLAFQ15004 111 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 ZNHIT3Q15649 155 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 CLEC12BQ2HXU8 276 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 NDUFAF6Q330K2 333 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 ZNF672Q499Z4 452 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 SFRP5Q5T4F7 317 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 METTL21CQ5VZV1 264 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 KANK2Q63ZY3 851 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 HEPHL1Q6MZM0 1159 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 RNF165Q6ZSG1 346 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 MTDHQ86UE4 582 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 LILRA2Q8N149 483 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 KBTBD8Q8NFY9 601 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 OR6Y1Q8NGX8 325 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 B4GALNT2Q8NHY0 566 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PSMA8Q8TAA3 256 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PIWIL2Q8TC59 973 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 GPR119Q8TDV5 335 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CDS1Q92903 461 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 METTL2AQ96IZ6 378 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 KLHL15Q96M94 604 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 MS4A4EQ96PG1 132 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CCT7Q99832 543 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PSD2Q9BQI7 771 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 BTBD10Q9BSF8 475 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 GATA5Q9BWX5 397 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 REG4Q9BYZ8 158 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PRRG4Q9BZD6 226 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 TRIM2Q9C040 744 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 SLCO5A1Q9H2Y9 848 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 SERHL2Q9H4I8 314 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CXorf56Q9H5V9 222 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 REEP4Q9H6H4 257 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 CXorf36Q9H7Y0 433 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 C3orf14Q9HBI5 128 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 LRTM1Q9HBL6 345 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 NPHS2Q9NP85 383 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 UBQLN4Q9NRR5 601 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 GLRX2Q9NS18 164 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 ACSS1Q9NUB1 689 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 GPATCH2Q9NW75 528 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 C1orf109Q9NX04 203 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PAQR5Q9NXK6 330 aaPredicted RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 NPAP1Q9NZP6 1156 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 KLHL13Q9P2N7 655 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 SLC17A7Q9P2U7 560 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 GIMAP2Q9UG22 337 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 PRSS50Q9UI38 385 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 KCNE5Q9UJ90 142 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 MCTS1Q9ULC4 181 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 DNAJC15Q9Y5T4 150 aa5.13□□□□□ -1.59
USP3-215ENST00000559771 SONP18583 2426 aaKnown RBP5.13□□□□□ -1.59
USP3-215ENST00000559771 STAB1Q9NY15 2570 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 A0A0G2JND7 137 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 GOLGA8QA0A0J9YX86 632 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 GOLGA8OA6NCC3 632 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 TMEM114B3SHH9 223 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 GOLGA8NF8WBI6 632 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SLCO1B7G3V0H7 640 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SLC28A1O00337 649 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZNF195O14628 629 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SMAD9O15198 467 aaKnown RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 SLC22A2O15244 555 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 GPRIN2O60269 458 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 DNAJA2O60884 412 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BCAS1O75363 584 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 SYNGR4O95473 234 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 H6PDO95479 791 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CHRNGP07510 517 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 KRT16P08779 473 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CELA3BP08861 270 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ALOX5P09917 674 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 LINC00032P0C843 101 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 T-ENOLP0DO92 83 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 LAMP1P11279 417 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BCKDHAP12694 445 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 CPA3P15088 417 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PRKCAP17252 672 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PTNP21246 168 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 BGNP21810 368 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ELK4P28324 431 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 PRDX6P30041 224 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 LCN1P31025 176 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 SERPINB5P36952 375 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 OR3A2P47893 321 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 ZNF41P51814 821 aaPredicted RBP5.12□□□□□ -1.59
USP3-215ENST00000559771 CARD18P57730 90 aa5.12□□□□□ -1.59
USP3-215ENST00000559771 RPS4XP62701 263 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms