RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 PRKD3O94806 890 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 OPN1LWP04000 364 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 HOXD4P09016 255 aaPredicted RBP19.49■□□□□ 0.71
SNX1-206ENST00000559389 MAP2K6P52564 334 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 MTX3Q5HYI7 312 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 ALG10BQ5I7T1 473 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 SWT1Q5T5J6 900 aaKnown RBP19.49■□□□□ 0.71
SNX1-206ENST00000559389 ULK3Q6PHR2 472 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 CYP2R1Q6VVX0 501 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 DEF8Q6ZN54 512 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 FKBP9P1Q75LS8 142 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 ADGRE4PQ86SQ3 457 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 DHFR2Q86XF0 187 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 RPRMLQ8N4K4 120 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 ADAMTS16Q8TE57 1224 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 MCUR1Q96AQ8 359 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 DMRTA2Q96SC8 542 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 VKORC1Q9BQB6 163 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 ALKBH4Q9NXW9 302 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 MEMO1Q9Y316 297 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 V9GYQ6 96 aa19.49■□□□□ 0.71
SNX1-206ENST00000559389 GTF3C1Q12789 2109 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 POLEQ07864 2286 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 CLCA1A8K7I4 914 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 ACOT8O14734 319 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 TNFSF11O14788 317 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 SEMG1P04279 462 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 IFNW1P05000 195 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 CCNA2P20248 432 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 RPS3AP61247 264 aaKnown RBP19.48■□□□□ 0.71
SNX1-206ENST00000559389 SF3B4Q15427 424 aaKnown RBP eCLIP19.48■□□□□ 0.71
SNX1-206ENST00000559389 TMEM176BQ3YBM2 270 aaPredicted RBP19.48■□□□□ 0.71
SNX1-206ENST00000559389 ASRGL1Q7L266 308 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 OR10D3Q8NH80 312 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 OR11A1Q9GZK7 315 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 POLR2J2Q9GZM3 115 aaKnown RBP19.48■□□□□ 0.71
SNX1-206ENST00000559389 POLR2J3Q9H1A7 115 aaKnown RBP19.48■□□□□ 0.71
SNX1-206ENST00000559389 CLCF1Q9UBD9 225 aa19.48■□□□□ 0.71
SNX1-206ENST00000559389 TCRBV5S2A0A599 114 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 TRAPPC13A5PLN9 417 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 CD8B2A6NJW9 211 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 ELOA3DA6NLF2 546 aaPredicted RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 KDM4EB2RXH2 506 aaPredicted RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 CCL21O00585 134 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 CHP2O43745 196 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 LYPD3O95274 346 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 THY1P04216 161 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 PNMTP11086 282 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 CXCR1P25024 350 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 FKBP2P26885 142 aaKnown RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 SLC7A1P30825 629 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 EIF1AXP47813 144 aaKnown RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 CLK1P49759 484 aaKnown RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 CDH12P55289 794 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 TRAP1Q12931 704 aaKnown RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 ELOA3BQ3SY89 546 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 NSUN5P2Q63ZY6 315 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 HBMQ6B0K9 141 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 RPTNQ6XPR3 784 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 B3GNT6Q6ZMB0 384 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 FJX1Q86VR8 437 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 MARVELD2Q8N4S9 558 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 ELOA3Q8NG57 546 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 SLC38A4Q969I6 547 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 SLC47A1Q96FL8 570 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 PYURFQ96I23 114 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 ZNF845Q96IR2 970 aaPredicted RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 PRRC1Q96M27 445 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 OR5B2Q96R09 309 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 UCN2Q96RP3 112 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 TRIB1Q96RU8 372 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 AMBRA1Q9C0C7 1298 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 MMADHCQ9H3L0 296 aaPredicted RBP19.47■□□□□ 0.71
SNX1-206ENST00000559389 SELENONQ9NZV5 590 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 SLC7A8Q9UHI5 535 aa19.47■□□□□ 0.71
SNX1-206ENST00000559389 A0A1W2PNR3 127 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 ZC3H12DA2A288 527 aaKnown RBP19.46■□□□□ 0.71
SNX1-206ENST00000559389 LRRTM2O43300 516 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 CXCL13O43927 109 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 OR5F1O95221 314 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 TFPIP10646 304 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 PDSS1Q5T2R2 415 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 SEM1Q6ZVN7 128 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 CHMP1BQ7LBR1 199 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 DDIT4LQ96D03 193 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 ARL5BQ96KC2 179 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 TTYH2Q9BSA4 534 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 TRIM15Q9C019 465 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 PAQR5Q9NXK6 330 aaPredicted RBP19.46■□□□□ 0.71
SNX1-206ENST00000559389 POMPQ9Y244 141 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 SLC5A6Q9Y289 635 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 HDGFL3Q9Y3E1 203 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 ESPL1Q14674 2120 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 KIAA1549Q9HCM3 1950 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 NBASA2RRP1 2371 aa19.46■□□□□ 0.71
SNX1-206ENST00000559389 A0A087WUJ7 227 aa19.45■□□□□ 0.7
SNX1-206ENST00000559389 MBD3L4A6NDZ8 208 aaPredicted RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 MBD3L3A6NE82 208 aaPredicted RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 MBD3L5A6NJ08 208 aaPredicted RBP19.45■□□□□ 0.7
SNX1-206ENST00000559389 A8MVM7 634 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms