RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CTSFQ9UBX1 484 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 CYB5R1Q9UHQ9 305 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SSR3Q9UNL2 185 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 EXO1Q9UQ84 846 aaKnown RBP2.97□□□□□ -1.93
HERC1-203ENST00000558532 OSGIN2Q9Y236 505 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 NCKAP1Q9Y2A7 1128 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SLC6A5Q9Y345 797 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 INSL5Q9Y5Q6 135 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 SNX8Q9Y5X2 465 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 COMMD10Q9Y6G5 202 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 TDRD15B5MCY1 1934 aaKnown RBP2.97□□□□□ -1.93
HERC1-203ENST00000558532 PAPPA2Q9BXP8 1791 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 NUP205Q92621 2012 aa2.97□□□□□ -1.93
HERC1-203ENST00000558532 PLXNA3P51805 1871 aa2.96□□□□□ -1.93
HERC1-203ENST00000558532 PLXNA4Q9HCM2 1894 aa2.96□□□□□ -1.93
HERC1-203ENST00000558532 MCM3APO60318 1980 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 A0A1B0GTQ1 180 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 C1orf226A1L170 272 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 OR2M5A3KFT3 312 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 TRABD2BA6NFA1 517 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ANKDD1BA6NHY2 528 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RRN3P2A6NIE6 340 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 PCP4L1A6NKN8 68 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 HMSDA8MTL9 139 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 LINC00587B1AMM8 73 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SUPT3HB4E1H0 165 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 B9A039 149 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 E9PAM4 449 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GTPBP1O00178 669 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 CACNB4O00305 520 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 SLC28A1O00337 649 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SYN3O14994 580 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 B4GALT5O43286 388 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RGS14O43566 566 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SLC28A2O43868 658 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RAD1O60671 282 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 EIF1BO60739 113 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 GALR3O60755 368 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 PSIP1O75475 530 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 CRCPO75575 148 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GCM2O75603 506 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 OR2A4O95047 310 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 OTCP00480 354 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 HPP00738 406 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ADAP00813 363 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 IGHV2-70P01814 119 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 HLA-DQA2P01906 255 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 VTNP04004 478 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 LCATP04180 440 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 TK1P04183 234 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 FGF1P05230 155 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 FHP07954 510 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 MMP2P08253 660 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GIPP09681 153 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 IQCF3P0C7M6 154 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 FCGR2AP12318 317 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SRCP12931 536 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 FOLR2P14207 255 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SPI1P17947 270 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 CXCL3P19876 107 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 HLA-DPA1P20036 260 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 UBA1P22314 1058 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 PPIBP23284 216 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 DNASE1P24855 282 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 HOXA6P31267 233 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GABRA5P31644 462 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SPAM1P38567 509 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 NNMTP40261 264 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RFC3P40938 356 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 SOX3P41225 446 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 EIF1P41567 113 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 CASP2P42575 452 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 XCR1P46094 333 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RFX3P48380 749 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 CCT3P49368 545 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 GPR143P51810 404 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ACLYP53396 1101 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 MVDP53602 400 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 PSMD4P55036 377 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 ARPP19P56211 112 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ZP1P60852 638 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 CDC42P60953 191 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 RPS14P62263 151 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 RPL38P63173 70 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 EFNB1P98172 346 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 BDH1Q02338 343 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 YWHAHQ04917 246 aaPredicted RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 CSTF1Q05048 431 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 C2orf80Q0P641 193 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ADIGQ0VDE8 80 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GPR17Q13304 367 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ILKQ13418 452 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 C1DQ13901 141 aaKnown RBP2.96□□□□□ -1.94
HERC1-203ENST00000558532 IHHQ14623 411 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 OPCMLQ14982 345 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ABRAXAS2Q15018 415 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 ZMYND11Q15326 602 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 MED22Q15528 200 aa2.96□□□□□ -1.94
HERC1-203ENST00000558532 GSG1Q2KHT4 349 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms