RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 CASKO14936 926 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 DNPH1O43598 174 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 EIF1BO60739 113 aaKnown RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 SMNDC1O75940 238 aaKnown RBP eCLIP7.59□□□□□ -1.19
TPM1-213ENST00000558400 AQP8O94778 261 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 YES1P07947 543 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 TFPIP10646 304 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 EPXP11678 715 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 PRF1P14222 555 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 ENPP1P22413 925 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 CXCR1P25024 350 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 PRKAR1BP31321 381 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 RNF144AP50876 292 aaPredicted RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 EPS8Q12929 822 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 KLF10Q13118 480 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 MYBPHQ13203 477 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 DAZAP2Q15038 168 aaPredicted RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 SYT14P1Q58G82 188 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 TMEM201Q5SNT2 666 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 INTS11Q5TA45 600 aaKnown RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 WBP2NLQ6ICG8 309 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 PPP4R4Q6NUP7 873 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 BEND4Q6ZU67 534 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 FCRLAQ7L513 359 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 BTLAQ7Z6A9 289 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 DHDDSQ86SQ9 333 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 LUZP2Q86TE4 346 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 SERPINA11Q86U17 422 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 MTDHQ86UE4 582 aaKnown RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 VRK2Q86Y07 508 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 MSRB3Q8IXL7 192 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 C11orf65Q8NCR3 313 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 HIPK4Q8NE63 616 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 OR6K3Q8NGY3 331 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 MAL2Q969L2 176 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 DDIT4LQ96D03 193 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 DACH2Q96NX9 599 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 OR5B2Q96R09 309 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 NPAS1Q99742 590 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 KLHDC3Q9BQ90 382 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 POTEKPQ9BYX7 375 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 TRIM8Q9BZR9 551 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 KLHL28Q9NXS3 571 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 KLHL9Q9P2J3 617 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 SLC13A4Q9UKG4 626 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 EDARQ9UNE0 448 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 PROCRQ9UNN8 238 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 ANGPT4Q9Y264 503 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 ZNF443Q9Y2A4 671 aaPredicted RBP7.59□□□□□ -1.19
TPM1-213ENST00000558400 AP3M1Q9Y2T2 418 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 AKAP9Q99996 3911 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 CACNA1CQ13936 2221 aa7.59□□□□□ -1.19
TPM1-213ENST00000558400 INTS1Q8N201 2190 aaKnown RBP7.59□□□□□ -1.2
TPM1-213ENST00000558400 ARHGAP21Q5T5U3 1957 aa7.59□□□□□ -1.2
TPM1-213ENST00000558400 CSMD2Q7Z408 3487 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 TMED7-TICAM2A0A0A6YYA0 188 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 LOC100653049A0A140TA62 436 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 DYNC1I1O14576 645 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 SS18L1O75177 396 aaPredicted RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 KRT34O76011 436 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 PMS2P2O95744 297 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CGAP01215 116 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 TACR3P29371 465 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CD79BP40259 229 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ACAA2P42765 397 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 KCNJ5P48544 419 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 DIO1P49895 249 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 TLE4Q04727 773 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 SCARB2Q14108 478 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 PDK3Q15120 406 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 GUSBP1Q15486 140 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ADRM1Q16186 407 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ZNF239Q16600 458 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 CYP51A1Q16850 503 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 TRMT5Q32P41 509 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 NANOGP8Q6NSW7 305 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 DHRS4L2Q6PKH6 230 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 PLXDC2Q6UX71 529 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ZNF836Q6ZNA1 936 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CLIP4Q8N3C7 705 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ZNF610Q8N9Z0 462 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 OR8J3Q8NGG0 315 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 NFKBIDQ8NI38 313 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 RP9Q8TA86 221 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 RNF128Q8TEB7 428 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 RASSF5Q8WWW0 418 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 ROBO4Q8WZ75 1007 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 LRRC58Q96CX6 371 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 USB1Q9BQ65 265 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 ECSITQ9BQ95 431 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CPPED1Q9BRF8 314 aaPredicted RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 HDHD5Q9BXW7 423 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 NSRP1Q9H0G5 558 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 KAT8Q9H7Z6 458 aaKnown RBP7.58□□□□□ -1.2
TPM1-213ENST00000558400 NANOGQ9H9S0 305 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 CTPS2Q9NRF8 586 aa7.58□□□□□ -1.2
TPM1-213ENST00000558400 RLIMQ9NVW2 624 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms