RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 CSNK1DP48730 415 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ARHGDIBP52566 201 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 EFNB2P52799 333 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KRTAP10-6P60371 365 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LAGE3Q14657 143 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM189A2Q15884 450 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 XKR3Q5GH77 459 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TTC23Q5W5X9 447 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SULT1C3Q6IMI6 304 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LANCL3Q6ZV70 420 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PTAR1Q7Z6K3 402 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CARM1Q86X55 608 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZC3H3Q8IXZ2 948 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRSS33Q8NF86 280 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR52K1Q8NGK4 314 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SAP25Q8TEE9 199 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC38A4Q969I6 547 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ITFG2Q969R8 447 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NT5C3BQ969T7 300 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAF2Q96CS3 445 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 C12orf66Q96MD2 445 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SLC25A51Q9H1U9 297 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 GBA3Q9H227 469 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ELOVL3Q9HB03 270 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NEDD4P46934 1319 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TTC21BQ7Z4L5 1316 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 A0A1W2PRD5 423 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF487B1APH4 448 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 WRBO00258 174 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NDUFAB1O14561 156 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SNAPINO95295 136 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SERPINA3P01011 423 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SERPIND1P05546 499 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PNMTP11086 282 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 GNB3P16520 340 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 GALP22466 123 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 OXTRP30559 389 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RFC2P35250 354 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCT6AP40227 531 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RGS4P49798 205 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 DMRTC1Q5HYR2 192 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LIPKQ5VXJ0 399 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF841Q6ZN19 808 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 Q6ZSR9 355 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 C1orf186Q6ZWK4 172 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 H2BFWTQ7Z2G1 175 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 UNC5CLQ8IV45 518 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NUDCD3Q8IVD9 361 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 UBQLNLQ8IYU4 475 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 MCOLN2Q8IZK6 566 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SVOPLQ8N434 492 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LIX1Q8N485 282 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR10G9Q8NGN4 311 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR1F12Q8NHA8 337 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RAB3IL1Q8TBN0 382 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 FNDC8Q8TC99 324 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PYROXD1Q8WU10 500 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 OSTF1Q92882 214 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 HAVCR1Q96D42 359 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 POM121L2Q96KW2 1035 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 APOL2Q9BQE5 337 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 STMN4Q9H169 189 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NXF5Q9H1B4 397 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NEK6Q9HC98 313 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 SMOXQ9NWM0 555 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LYARQ9NX58 379 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TAS2R16Q9NYV7 291 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ABCD2Q9UBJ2 740 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NUFIP1Q9UHK0 495 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NRXN3Q9Y4C0 1643 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TTC37Q6PGP7 1564 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF608Q9ULD9 1512 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGHV3-38A0A0C4DH36 116 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 E9PQ18 207 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRDMT1O14717 391 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KRT6AP02538 564 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LGALS2P05162 132 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PNMA6AP0CW24 399 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CT45A10P0DMU9 189 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TSPAN8P19075 237 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 MARK3P27448 753 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRDX3P30048 256 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 EPHX2P34913 555 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ID1P41134 155 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAGEA8P43361 318 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KIR2DS4P43632 304 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ARRB1P49407 418 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KPNA2P52292 529 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ARFIP1P53367 373 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 GNB1P62873 340 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 BCL2L1Q07817 233 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ORC2Q13416 577 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TFDP1Q14186 410 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 KIAA0040Q15053 153 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 VPS26BQ4G0F5 336 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PHYHD1Q5SRE7 291 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 LDLRAP1Q5SW96 308 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 DCAF12Q5T6F0 453 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRAMEF5Q5TYX0 476 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms