RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CBLCQ9ULV8 474 aa5.13□□□□□ -1.59
GABPB1-207ENST00000558335 CLCA2Q9UQC9 943 aa5.13□□□□□ -1.59
GABPB1-207ENST00000558335 NCKAP1Q9Y2A7 1128 aa5.13□□□□□ -1.59
GABPB1-207ENST00000558335 SPIN1Q9Y657 262 aaPredicted RBP5.13□□□□□ -1.59
GABPB1-207ENST00000558335 KCNMB2Q9Y691 235 aa5.13□□□□□ -1.59
GABPB1-207ENST00000558335 COLEC10Q9Y6Z7 277 aa5.13□□□□□ -1.59
GABPB1-207ENST00000558335 NUP210Q8TEM1 1887 aaPredicted RBP5.13□□□□□ -1.59
GABPB1-207ENST00000558335 TRBV4-1A0A0J9YWV2 114 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 A0A1W2PQL4 384 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SLC22A23A1A5C7 686 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SLC22A31A6NKX4 558 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 TMEM229AB2RXF0 380 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ANHXE9PGG2 379 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HMGN4O00479 90 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PLPP1O14494 284 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 YY2O15391 372 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 LRRTM2O43300 516 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PQBP1O60828 265 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 FKTNO75072 461 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 MED6O75586 246 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 UBXN7O94888 489 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ETHE1O95571 254 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ADH1BP00325 375 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 THBS1P07996 1170 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GUSBP08236 651 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SPNP16150 400 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 BMP7P18075 431 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HNF1AP20823 631 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 S1PR1P21453 382 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 FSHRP23945 695 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RBMS1P29558 406 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CMPK1P30085 196 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HTR1FP30939 366 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GRK5P34947 590 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 BSGP35613 385 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 BUD31P41223 144 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CTSOP43234 321 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CDKN1BP46527 198 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RAB28P51157 221 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CTSCP53634 463 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 AP3S2P59780 193 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RAP1BP61224 184 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RRAS2P62070 204 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HTRA4P83105 476 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SORDQ00796 357 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PRDX1Q06830 199 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HNRNPA0Q13151 305 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GANABQ14697 944 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GPNMBQ14956 572 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PDGFRLQ15198 375 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SF1Q15637 639 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GPR68Q15743 365 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SSX1Q16384 188 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HFEQ30201 348 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 DEFB115Q30KQ5 88 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HNRNPA1L2Q32P51 320 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 FNDC3BQ53EP0 1204 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CRTC2Q53ET0 693 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF385BQ569K4 471 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF628Q5EBL2 1059 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PRSS36Q5K4E3 855 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SLC35D3Q5M8T2 416 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ATAT1Q5SQI0 421 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 B3GNTL1Q67FW5 361 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 LAMTOR1Q6IAA8 161 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RGS7BPQ6MZT1 257 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PODNL1Q6PEZ8 512 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HAGHLQ6PII5 290 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 TRILQ7L0X0 811 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 PARS2Q7L3T8 475 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CXXC5Q7LFL8 322 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 TSEN54Q7Z6J9 526 aaKnown RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 NRARPQ7Z6K4 114 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZBTB46Q86UZ6 589 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 TMEM25Q86YD3 366 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SVBPQ8N300 66 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 Q8N402 240 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HDDC3Q8N4P3 179 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF655Q8N720 491 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HORMAD2Q8N7B1 307 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 CELF2-AS1Q8N7Q2 184 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 POMGNT2Q8NAT1 580 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 POGLUT1Q8NBL1 392 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 UXS1Q8NBZ7 420 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 BVESQ8NE79 360 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 OR2T33Q8NG76 320 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 OR2D3Q8NGH3 330 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 NUDT8Q8WV74 236 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 EDARADDQ8WWZ3 215 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 GATAD2BQ8WXI9 593 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SUSD6Q92537 303 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 TM9SF4Q92544 642 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 HGDQ93099 445 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 UBE2FQ969M7 185 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 RNFT2Q96EX2 444 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 MRGPRX3Q96LB0 322 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 NOL4LQ96MY1 436 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 SFXN2Q96NB2 322 aa5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF582Q96NG8 517 aaPredicted RBP5.12□□□□□ -1.59
GABPB1-207ENST00000558335 ZNF385AQ96PM9 386 aaKnown RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms