RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GAPDHSO14556 408 aaPredicted RBP13.07□□□□□ -0.32
SPG11-210ENST00000558319 MPC1LP0DKB6 136 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 CCL11P51671 97 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 DUSP7Q16829 419 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 C9orf152Q5JTZ5 239 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 TMEM201Q5SNT2 666 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 MYH3P11055 1940 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 PDGFAP04085 211 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 AAK1Q2M2I8 961 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 STEAP3Q658P3 488 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 HSD11B1LQ7Z5J1 315 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 LACC1Q8IV20 430 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 FUBP1Q96AE4 644 aaKnown RBP13.07□□□□□ -0.32
SPG11-210ENST00000558319 ARPC5LQ9BPX5 153 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 ULBP3Q9BZM4 244 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 A0A087WZY1 265 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 SNRPBP14678 240 aaKnown RBP13.07□□□□□ -0.32
SPG11-210ENST00000558319 GABRB3P28472 473 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 EIF4HQ15056 248 aaKnown RBP13.07□□□□□ -0.32
SPG11-210ENST00000558319 FAM111BQ6SJ93 734 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 TMEM64Q6YI46 380 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 COMMD6Q7Z4G1 85 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 ADOQ96SZ5 270 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 C12orf49Q9H741 205 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 MYH15Q9Y2K3 1946 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 EMP3P54852 163 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 OGFOD3Q6PK18 319 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 MIB2Q96AX9 1013 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 SLC25A31Q9H0C2 315 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 GNB4Q9HAV0 340 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 DYNLRB1Q9NP97 96 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 GAB2Q9UQC2 676 aa13.07□□□□□ -0.32
SPG11-210ENST00000558319 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 H3BUI4 141 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 KIAA1024LP59773 190 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 RPP30P78346 268 aaKnown RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 GLB1L2Q8IW92 636 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 FRMD1Q8N878 549 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 RSPRY1Q96DX4 576 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 C1QTNF6Q9BXI9 259 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SMCO4Q9NRQ5 59 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 PLEK2Q9NYT0 353 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 PRSS21Q9Y6M0 314 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 DPM1O60762 260 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 GABRA5P31644 462 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.06□□□□□ -0.32
SPG11-210ENST00000558319 ZNF597Q96LX8 424 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 APOOQ9BUR5 198 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 MTHFD2LQ9H903 347 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 AGPAT4Q9NRZ5 378 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 TMEM235A6NFC5 223 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 PRKRAO75569 313 aaKnown RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 SLC10A1Q14973 349 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 ISCA2Q86U28 154 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 PDZD3Q86UT5 571 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 ADGRG5Q8IZF4 528 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SIMC1Q8NDZ2 872 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 L3HYPDHQ96EM0 354 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 ACTRT3Q9BYD9 372 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 MED20Q9H944 212 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 E7ESA3 106 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 NFYAP23511 347 aaPredicted RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 ELAVL3Q14576 367 aaKnown RBP13.06□□□□□ -0.32
SPG11-210ENST00000558319 VRK2Q86Y07 508 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SIAH1Q8IUQ4 282 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 FAM58AQ8N1B3 248 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 ZNF417Q8TAU3 575 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 NICN1Q9BSH3 213 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 POLHQ9Y253 713 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SULT2B1O00204 365 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 MEF2DQ14814 521 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 C22orf15Q8WYQ4 148 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 SLC35B4Q969S0 331 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 C12orf42Q96LP6 360 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 MVB12BQ9H7P6 319 aa13.06□□□□□ -0.32
SPG11-210ENST00000558319 ANKRD12Q6UB98 2062 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 KRBOX1C9JBD0 128 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 SOCS5O75159 536 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 TUSC2O75896 110 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 CCR6P51684 374 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 DCAF13Q9NV06 445 aaKnown RBP13.05□□□□□ -0.32
SPG11-210ENST00000558319 VAPAQ9P0L0 249 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 NDUFB2O95178 105 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 C5AR1P21730 350 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 BMPR1AP36894 532 aa13.05□□□□□ -0.32
SPG11-210ENST00000558319 RABIFP47224 123 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms