RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 DDX28Q9NUL7 540 aaKnown RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 HIF1ANQ9NWT6 349 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 GIN1Q9NXP7 522 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 RNF14Q9UBS8 474 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 MALT1Q9UDY8 824 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 STK38LQ9Y2H1 464 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 DTNAQ9Y4J8 743 aa4.51□□□□□ -1.69
SPG11-208ENST00000558155 SPIN1Q9Y657 262 aaPredicted RBP4.51□□□□□ -1.69
SPG11-208ENST00000558155 NUP214P35658 2090 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TRAV20A0A0B4J274 112 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ZNF716A6NP11 495 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 A8MT66 165 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 hCG_2039718K7EN88 272 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 PDLIM1O00151 329 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ETV2O00321 342 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 KLF11O14901 512 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ANKRD28O15084 1053 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 PDPK1O15530 556 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ZNF264O43296 627 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ZSCAN12O43309 604 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 DNPH1O43598 174 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SLU7O95391 586 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 PMS2P2O95744 297 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TFP02787 698 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ITGA5P08648 1049 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 NPR2P20594 1047 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 IMPDH1P20839 514 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 EPHA1P21709 976 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 FPR2P25090 351 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MPGP29372 298 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 PHBP35232 272 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 APOBEC1P41238 236 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 CLK1P49759 484 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 CCR4P51679 360 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SLC16A1P53985 500 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 FOXG1P55316 489 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 PKNOX1P55347 436 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TMEM33P57088 247 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SESN3P58005 492 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 OR2B6P58173 313 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 UBE2NP61088 152 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 MERTKQ12866 999 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 RIN1Q13671 783 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 CCNIQ14094 377 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TRIP10Q15642 601 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ADIPOQQ15848 244 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MIDNQ504T8 468 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 UNC50Q53HI1 259 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ZNF678Q5SXM1 525 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 CCNJQ5T5M9 372 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 NOXRED1Q6NXP6 359 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ANKRD16Q6P6B7 361 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 VHLLQ6RSH7 139 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ABHD12BQ7Z5M8 362 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 CREG2Q8IUH2 290 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TMCO5AQ8N6Q1 288 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ZNF614Q8N883 585 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 OR52E4Q8NGH9 312 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 OR51F2Q8NH61 342 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 FBXO30Q8TB52 745 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ADAMTS15Q8TE58 950 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ST8SIA1Q92185 356 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MRPL24Q96A35 216 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 GIMAP5Q96F15 307 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 METTL2AQ96IZ6 378 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 ARL5BQ96KC2 179 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ANKRD27Q96NW4 1050 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MS4A4EQ96PG1 132 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SLC38A2Q96QD8 506 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 LRRC37BQ96QE4 947 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 STACQ99469 402 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 DOK1Q99704 481 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 NAA11Q9BSU3 229 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 THUMPD3Q9BV44 507 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 LAT2Q9GZY6 243 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 CDC42EP4Q9H3Q1 356 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 ANKZF1Q9H8Y5 726 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 NTN4Q9HB63 628 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MOV10Q9HCE1 1003 aaKnown RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 DYNLRB1Q9NP97 96 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SLC52A3Q9NQ40 469 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 RRAGDQ9NQL2 400 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 DUSP22Q9NRW4 184 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 ACER3Q9NUN7 267 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TMEM45AQ9NWC5 275 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SH3BP4Q9P0V3 963 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 PRDM4Q9UKN5 801 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 TRAPPC4Q9Y296 219 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 HDGFL3Q9Y3E1 203 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SPEF1Q9Y4P9 236 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 POLR3HQ9Y535 204 aaPredicted RBP4.5□□□□□ -1.69
SPG11-208ENST00000558155 TIMM22Q9Y584 194 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 SAR1BQ9Y6B6 198 aa4.5□□□□□ -1.69
SPG11-208ENST00000558155 MGAM2Q2M2H8 2515 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 IGHV1-18A0A0C4DH31 117 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SH3PXD2BA1X283 911 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 POM121CA8CG34 1229 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ESPNB1AK53 854 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms