RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 OR4K5Q8NGD3 323 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 OR14L1PQ8NHC6 308 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 SLC7A13Q8TCU3 470 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 WBP1Q96G27 269 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 CIB1Q99828 191 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 WFDC6Q9BQY6 131 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 TEX12Q9BXU0 123 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 DGCR6LQ9BY27 220 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 TTTY12Q9BZ98 90 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 UBQLN3Q9H347 655 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 USE1Q9NZ43 259 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 RHCGQ9UBD6 479 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 CHRNA9Q9UGM1 479 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 OSGIN1Q9UJX0 560 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 FBXL2Q9UKC9 423 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 VDAC3Q9Y277 283 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 POFUT2Q9Y2G5 429 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 TMED7Q9Y3B3 224 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 AP4B1Q9Y6B7 739 aa11.25□□□□□ -0.61
TPM1-209ENST00000558072 TRAV36DV7A0A075B6V5 113 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 A0A087WUU8 490 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 LRRC3CA6NJW4 275 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 SAC3D1A6NKF1 404 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 HCN1O60741 890 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 SEMA7AO75326 666 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 TRAPPC6AO75865 159 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 GLSO94925 669 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 AHSA1O95433 338 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 NTN1O95631 604 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 MT-ATP6P00846 226 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 HIST1H2ABP04908 130 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 SLC9A3P48764 834 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 NUP107P57740 925 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 GPR85P60893 370 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 RAC1P63000 192 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 PRKCDQ05655 676 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 RAET1LQ5VY80 246 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 C1orf94Q6P1W5 598 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 HIST3H2AQ7L7L0 130 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 HIST1H2ACQ93077 130 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 PNPLA2Q96AD5 504 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 TAPBPLQ9BX59 468 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 ZNF703Q9H7S9 590 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 ZNF71Q9NQZ8 489 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 CTPS2Q9NRF8 586 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 PAQR5Q9NXK6 330 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 TP53TG5Q9Y2B4 290 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 HDGFL3Q9Y3E1 203 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 EML6Q6ZMW3 1958 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 PTPRQQ9UMZ3 2332 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 CFAP47Q6ZTR5 3102 aa11.24□□□□□ -0.61
TPM1-209ENST00000558072 MAP1BP46821 2468 aaKnown RBP11.24□□□□□ -0.61
TPM1-209ENST00000558072 TRBV4-1A0A0J9YWV2 114 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 TFECO14948 347 aaPredicted RBP11.23□□□□□ -0.61
TPM1-209ENST00000558072 DNPH1O43598 174 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 GMFGO60234 142 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 SUSD5O60279 629 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 ADAM11O75078 769 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 RCBTB2O95199 551 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 ACTL6AO96019 429 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PEPDP12955 493 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 ZNF24P17028 368 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 IGFBP5P24593 272 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 FPR3P25089 353 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 GTF2E2P29084 291 aaKnown RBP11.23□□□□□ -0.61
TPM1-209ENST00000558072 RPS6KA3P51812 740 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 FOXF1Q12946 379 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 TSPAN31Q12999 210 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 SF3B4Q15427 424 aaKnown RBP eCLIP11.23□□□□□ -0.611e-9■■□□□ 12.9
TPM1-209ENST00000558072 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 OTUD3Q5T2D3 398 aaPredicted RBP11.23□□□□□ -0.61
TPM1-209ENST00000558072 FAHD1Q6P587 224 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PCSK4Q6UW60 755 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 ARSKQ6UWY0 536 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 TMPRSS11FQ6ZWK6 438 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 ADGRG3Q86Y34 549 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 NKAIN4Q8IVV8 208 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PARP8Q8N3A8 854 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 CBR4Q8N4T8 237 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 FAM83FQ8NEG4 500 aaPredicted RBP11.23□□□□□ -0.61
TPM1-209ENST00000558072 ZHX1-C8orf76Q96EF9 292 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 SGTBQ96EQ0 304 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 SFXN2Q96NB2 322 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PRSS27Q9BQR3 290 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 FUZQ9BT04 418 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PRR14Q9BWN1 585 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 Q9H521 79 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 TIGARQ9NQ88 270 aa11.23□□□□□ -0.61
TPM1-209ENST00000558072 PAPOLBQ9NRJ5 636 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms