RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 ENPP4Q9Y6X5 453 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 POLEQ07864 2286 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 GTF3C1Q12789 2109 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 DHRS12A0PJE2 317 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 TRAPPC13A5PLN9 417 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 PRSS23O95084 383 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 TPOP07202 933 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF708P17019 499 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 CXCR1P25024 350 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 KPNB1Q14974 876 aaKnown RBP13.76□□□□□ -0.21
NEDD1-213ENST00000557644 TMEM176BQ3YBM2 270 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-213ENST00000557644 EMC4Q5J8M3 183 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 C3orf33Q6P1S2 294 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 PLXDC2Q6UX71 529 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ZDHHC21Q8IVQ6 265 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 DNAJA4Q8WW22 397 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-213ENST00000557644 SLC38A4Q969I6 547 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 PRRC1Q96M27 445 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF300Q96RE9 604 aaPredicted RBP13.76□□□□□ -0.21
NEDD1-213ENST00000557644 ALKBH4Q9NXW9 302 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 CAMK2AQ9UQM7 478 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 AP4B1Q9Y6B7 739 aa13.76□□□□□ -0.21
NEDD1-213ENST00000557644 A0A1W2PNR3 127 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 OR14I1A6ND48 311 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 LINC01387J3KSC0 135 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 SLC19A2O60779 497 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 FABP3P05413 133 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 ABOP16442 354 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 CTU2Q2VPK5 515 aaKnown RBP13.75□□□□□ -0.21
NEDD1-213ENST00000557644 GXYLT1Q4G148 440 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 C1QL3Q5VWW1 255 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 CD163Q86VB7 1156 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 ARL5BQ96KC2 179 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 RAB3IPQ96QF0 476 aaPredicted RBP13.75□□□□□ -0.21
NEDD1-213ENST00000557644 SERINC1Q9NRX5 453 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 A0A0J9YW62 118 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 ELOA3DA6NLF2 546 aaPredicted RBP13.75□□□□□ -0.21
NEDD1-213ENST00000557644 EIF1AYO14602 144 aaKnown RBP13.75□□□□□ -0.21
NEDD1-213ENST00000557644 TNFSF11O14788 317 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 CHP2O43745 196 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 UQCRFS1P47985 274 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 CHRNB3Q05901 458 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 ELOA3BQ3SY89 546 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 FAM98BQ52LJ0 330 aaKnown RBP13.75□□□□□ -0.21
NEDD1-213ENST00000557644 SYT14P1Q58G82 188 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 C3P1Q6ZMU1 363 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 NKAIN4Q8IVV8 208 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 ELOA3Q8NG57 546 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 SLCO4A1Q96BD0 722 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 PRSS27Q9BQR3 290 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 MAGIXQ9H6Y5 334 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 SELENONQ9NZV5 590 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 TINAGQ9UJW2 476 aa13.75□□□□□ -0.21
NEDD1-213ENST00000557644 IGKV1D-42A0A075B6H8 117 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 A0A087WUJ7 227 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 KDM4EB2RXH2 506 aaPredicted RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 PYCARD-AS1I3L0S3 204 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 OR5F1O95221 314 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 TFPIP10646 304 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 CPN1P15169 458 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 EGR4Q05215 589 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 WLSQ5T9L3 541 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF585AQ6P3V2 769 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 FAM57AQ8TBR7 257 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 KLHL15Q96M94 604 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 OR5B2Q96R09 309 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 CHID1Q9BWS9 393 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 PRDM14Q9GZV8 571 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 DENND2DQ9H6A0 471 aaPredicted RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 NMNAT1Q9HAN9 279 aaPredicted RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 MAN2C1Q9NTJ4 1040 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 SH3BGRL2Q9UJC5 107 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF835Q9Y2P0 537 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 FAM32AQ9Y421 112 aaKnown RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 RHCEP18577 417 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 MAGEA2P43356 314 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 TMEM255BQ8WV15 326 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
NEDD1-213ENST00000557644 ADGRG7Q96K78 797 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 FNDC11Q9BVV2 318 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 PRDM4Q9UKN5 801 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 TESMINQ9Y4I5 508 aa13.74□□□□□ -0.21
NEDD1-213ENST00000557644 BCKDKO14874 412 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 GPIP06744 558 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 RAP2AP10114 183 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 PNMTP11086 282 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 UMPSP11172 480 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 GNLYP22749 145 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 SLC7A1P30825 629 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ACTR3P61158 418 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 BCL2A1Q16548 175 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 LINC00114Q6XXX2 140 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 DOLPP1Q86YN1 238 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 OFCC1Q8IZS5 231 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 OR52J3Q8NH60 311 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 PIP5K1AQ99755 562 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms