RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 ERVH48-1M5A8F1 160 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 ORC5O43913 435 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 ZNF3P17036 446 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 PRKCAP17252 672 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 TALDO1P37837 337 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 MAP3K8P41279 467 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 GPLD1P80108 840 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 MAT1AQ00266 395 aaKnown RBP16.32■□□□□ 0.2
XRCC3-218ENST00000557439 BDH1Q02338 343 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 Q6ZSR6 202 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 PRSS45Q7RTY3 260 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 NANOGNBQ7Z5D8 188 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 TCTE3Q8IZS6 198 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 OR13H1Q8NG92 308 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 BAHD1Q8TBE0 780 aaPredicted RBP16.32■□□□□ 0.2
XRCC3-218ENST00000557439 GCDHQ92947 438 aaPredicted RBP16.32■□□□□ 0.2
XRCC3-218ENST00000557439 SPACA7Q96KW9 195 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 PDCD1LG2Q9BQ51 273 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 NUDT15Q9NV35 164 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 CPNE7Q9UBL6 633 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 SATB2Q9UPW6 733 aa16.32■□□□□ 0.2
XRCC3-218ENST00000557439 FZD7O75084 574 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 ATF1P18846 271 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 F8A1P23610 371 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 PITPNBP48739 271 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 FAM205BPQ63HN1 556 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 KIRREL2Q6UWL6 708 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 METTL27Q8N6F8 245 aaPredicted RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 LYRM4Q9HD34 91 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 DNAJB12Q9NXW2 375 aaKnown RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 AK6Q9Y3D8 172 aaKnown RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 IER3IP1Q9Y5U9 82 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 A0A087WV62 115 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 SLC43A1O75387 559 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 GAAP10253 952 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 ST6GAL1P15907 406 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 ZNF10P21506 573 aaPredicted RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 HNRNPA2B1P22626 353 aaKnown RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 CFL1P23528 166 aaKnown RBP16.31■□□□□ 0.2
XRCC3-218ENST00000557439 SLC6A1P30531 599 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 CTHP32929 405 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 DGCR2P98153 550 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 FCN2Q15485 313 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 LAMTOR1Q6IAA8 161 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 SLC22A18ASQ8N1D0 253 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 GATSQ8NAP1 163 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 SLC37A2Q8TED4 501 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 STACQ99469 402 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 CCDC3Q9BQI4 270 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 HSPB11Q9Y547 144 aa16.31■□□□□ 0.2
XRCC3-218ENST00000557439 A0A0A6YYC8 382 aaPredicted RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 I3L1I5 382 aaPredicted RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 CHP2O43745 196 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 HK1P19367 917 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 DRD5P21918 477 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 HTR2BP41595 481 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 TPMTP51580 245 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 THOC7Q6I9Y2 204 aaKnown RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 ZFAND1Q8TCF1 268 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 DEDD2Q8WXF8 326 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 ACOT12Q8WYK0 555 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 CTHRC1Q96CG8 243 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 DNAJA3Q96EY1 480 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 OR14A2Q96R54 314 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 BEX1Q9HBH7 125 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 ST6GALNAC2Q9UJ37 374 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 KLHL21Q9UJP4 597 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 NCKAP1Q9Y2A7 1128 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 SLCO1B1Q9Y6L6 691 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 SPACA6W5XKT8 324 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 CACNA1CQ13936 2221 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 SELENOFO60613 162 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 TSC22D2O75157 780 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 ADRB1P08588 477 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 PEPDP12955 493 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 DMKNQ6E0U4 476 aaPredicted RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 TIGD4Q8IY51 512 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 AVL9Q8NBF6 648 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 PHF21AQ96BD5 680 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 PELI1Q96FA3 418 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 LMF1Q96S06 567 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 UBL7Q96S82 380 aaPredicted RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 WBP1LQ9NX94 342 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 MRPL15Q9P015 296 aaKnown RBP16.3■□□□□ 0.2
XRCC3-218ENST00000557439 LRIT1Q9P2V4 623 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 COPS3Q9UNS2 423 aa16.3■□□□□ 0.2
XRCC3-218ENST00000557439 EML5Q05BV3 1969 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 ZNF780AO75290 641 aaPredicted RBP16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SC5DO75845 299 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 SOX30O94993 753 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 RAB3BP20337 219 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NPR2P20594 1047 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 AHCYP23526 432 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 CCR6P51684 374 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 PGDP52209 483 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 HYAL1Q12794 435 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 NTRK2Q16620 822 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 ZNF613Q6PF04 617 aa16.29■□□□□ 0.2
XRCC3-218ENST00000557439 BEST4Q8NFU0 473 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms