RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 FUT5Q11128 374 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 STX3Q13277 289 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 VEZF1Q14119 521 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 GPAT3Q53EU6 434 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 SPANXN4Q5MJ08 99 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 ABLIM2Q6H8Q1 611 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 UBE2J2Q8N2K1 259 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 ARFGAP2Q8N6H7 521 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 ARL5BQ96KC2 179 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 SLC35A5Q9BS91 424 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 REG4Q9BYZ8 158 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 NUF2Q9BZD4 464 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 EXOSC3Q9NQT5 275 aaKnown RBP14.03□□□□□ -0.16
TUBB3-213ENST00000557262 BTNL2Q9UIR0 455 aa14.03□□□□□ -0.16
TUBB3-213ENST00000557262 OR5H1A6NKK0 313 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 ZNF716A6NP11 495 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 KIAA1324LA8MWY0 1029 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-213ENST00000557262 SHISA9B4DS77 424 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 RNF223E7ERA6 249 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 E9PBE3 544 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 HMGN4O00479 90 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 DNPH1O43598 174 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 CD8AP01732 235 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 THBS1P07996 1170 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 BGNP21810 368 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 HTR3AP46098 478 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 IDH2P48735 452 aaKnown RBP14.02□□□□□ -0.17
TUBB3-213ENST00000557262 FAPQ12884 760 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 FAM174BQ3ZCQ3 159 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 HMGN2P46Q86SG4 172 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 PIGXQ8TBF5 258 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 APH1AQ96BI3 265 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 RADILQ96JH8 1075 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 CCDC115Q96NT0 180 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 TRAF4Q9BUZ4 470 aaPredicted RBP14.02□□□□□ -0.17
TUBB3-213ENST00000557262 SLCO5A1Q9H2Y9 848 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 ALG2Q9H553 416 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 MEAF6Q9HAF1 191 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 KCNK9Q9NPC2 374 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 FAIMQ9NVQ4 179 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 PNPOQ9NVS9 261 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 TRAPPC4Q9Y296 219 aa14.02□□□□□ -0.17
TUBB3-213ENST00000557262 GOLGA8QA0A0J9YX86 632 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CIB4A0PJX0 185 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 GOLGA8OA6NCC3 632 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CCDC154A6NI56 674 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CCT8L1PA6NM43 557 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CLDN24A6NM45 220 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 GOLGA8NF8WBI6 632 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 MRPL33O75394 65 aaKnown RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 IGHV3-9P01782 118 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CCNA2P20248 432 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 NTF4P34130 210 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 ACVR1BP36896 505 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 MAGEA8P43361 318 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 ANXA11P50995 505 aaKnown RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 SLC16A1P53985 500 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 OR2B6P58173 313 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 UFM1P61960 85 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 TXNL4AP83876 142 aaKnown RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 HPCAP84074 193 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 MPP2Q14168 576 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 OGFOD2Q6N063 350 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 DTX2Q86UW9 622 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 RNF130Q86XS8 419 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CCDC103Q8IW40 242 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CMIPQ8IY22 773 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 TRIML2Q8N7C3 387 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CNOT9Q92600 299 aaKnown RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 PMM1Q92871 262 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 TEX37Q96LM6 180 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 TRNT1Q96Q11 434 aaKnown RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 OR11A1Q9GZK7 315 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 MTHFD2LQ9H903 347 aaPredicted RBP14.01□□□□□ -0.17
TUBB3-213ENST00000557262 ASB6Q9NWX5 421 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 NPAP1Q9NZP6 1156 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 TMEM181Q9P2C4 612 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 MGAT4BQ9UQ53 548 aa14.01□□□□□ -0.17
TUBB3-213ENST00000557262 CADP27708 2225 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 TMED7-TICAM2A0A0A6YYA0 188 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 AGAP5A6NIR3 686 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 ABCD4O14678 606 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 ADAM11O75078 769 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 CRLF1O75462 422 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 RAD51DO75771 328 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 IGHV4-39P01824 125 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 C1QCP02747 245 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 PTAFRP25105 342 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 MAP2K6P52564 334 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 H3F3AP84243 136 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 KRTAP1-1Q07627 177 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 SYPL1Q16563 259 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 TNFAIP8L3Q5GJ75 292 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 AGAP6Q5VW22 663 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 TMEM108Q6UXF1 575 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 LRRC74BQ6ZQY2 392 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 ZNF621Q6ZSS3 439 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 SPATA19Q7Z5L4 167 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 ANKFN1Q8N957 763 aa14□□□□□ -0.17
TUBB3-213ENST00000557262 MAPK1IP1LQ8NDC0 245 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms