RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 EXOC3L2Q2M3D2 409 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 YIF1BQ5BJH7 314 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF766Q5HY98 468 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PLEKHS1Q5SXH7 462 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 FAM69AQ5T7M9 428 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 DDI2Q5TDH0 399 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SLC8B1Q6J4K2 584 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 METAP1DQ6UB28 335 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PLET1Q6UQ28 207 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 FAM131AQ6UXB0 335 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 CREB3L2Q70SY1 520 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 HDDC2Q7Z4H3 204 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 KLHDC8AQ8IYD2 350 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 TAGAPQ8N103 731 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 C10orf111Q8N326 155 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 LINC00471Q8N535 108 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 LSMEM1Q8N8F7 131 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 HJURPQ8NCD3 748 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PROKR2Q8NFJ6 384 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 OR4A15Q8NGL6 344 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ZCCHC10Q8TBK6 192 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ZFAND1Q8TCF1 268 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RAET1EQ8TD07 263 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 LKAAEAR1Q8TD35 194 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PIH1D2Q8WWB5 315 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RAB40AQ8WXH6 277 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 NEUROG1Q92886 237 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SLC25A46Q96AG3 418 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MTERF3Q96E29 417 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ZC3HAV1LQ96H79 300 aaKnown RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RNF170Q96K19 258 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 VPS35Q96QK1 796 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 COPS8Q99627 209 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SDHCQ99643 169 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 COQ7Q99807 217 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 KCNS3Q9BQ31 491 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MED18Q9BUE0 208 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RSPH9Q9H1X1 276 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 EPHX3Q9H6B9 360 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 RNF121Q9H920 327 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ANKRA2Q9H9E1 313 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SLC25A19Q9HC21 320 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 EXOSC4Q9NPD3 245 aaKnown RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ISYNA1Q9NPH2 558 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 GKN1Q9NS71 199 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 GIMAP4Q9NUV9 329 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ACOXLQ9NUZ1 547 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 NDUFB11Q9NX14 153 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 PAQR5Q9NXK6 330 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-246ENST00000557030 QPCTLQ9NXS2 382 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 LHX3Q9UBR4 397 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ATP6V1HQ9UI12 483 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 STOML2Q9UJZ1 356 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 GPR34Q9UPC5 381 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MGAT4BQ9UQ53 548 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ASB4Q9Y574 426 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 SNX8Q9Y5X2 465 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 ENPP4Q9Y6X5 453 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 V9GYH0 126 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MIA3Q5JRA6 1907 aa4.33□□□□□ -1.72
ATXN3-246ENST00000557030 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IGLV3-16A0A075B6K0 115 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 A0A087X0M5 115 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1B0GX30 115 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1W2PQ09 198 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 A0A1W2PQ67 120 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 FABP12A6NFH5 140 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 SNTNA6NMZ2 147 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 B4DXG7 233 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 FAM157AC9JC47 383 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PRR23D1E9PI22 279 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GFYI3L273 518 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 FAAHO00519 579 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ZNF197O14709 1029 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ORC5O43913 435 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GPX5O75715 221 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 AP2A2O94973 939 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 GADD45GO95257 159 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CRYZL1O95825 349 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IGSF6O95976 241 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 HLA-DQB1P01920 261 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 DNTTP04053 509 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IFNW1P05000 195 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 URODP06132 367 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ACAA1P09110 424 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 ANXA4P09525 319 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TSPAN19P0C672 248 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PRR23D2P0DMB1 279 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 PRKAR1AP10644 381 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 LAMP1P11279 417 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 HLA-EP13747 358 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 EPORP19235 508 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 IDSP22304 550 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CFL1P23528 166 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CORO1AP31146 461 aaKnown RBP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 TIA1P31483 386 aaKnown RBP eCLIP4.32□□□□□ -1.72
ATXN3-246ENST00000557030 OR1D2P34982 312 aa4.32□□□□□ -1.72
ATXN3-246ENST00000557030 CRYBB2P43320 205 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms