RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 ZNF3P17036 446 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 CD53P19397 219 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 NT5EP21589 574 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 LCN1P31025 176 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 TSPAN5P62079 268 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 MFSD13AQ14CX5 517 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RPE65Q16518 533 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 EIPR1Q53HC9 387 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 CLLU1Q5K131 121 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 DCST2Q5T1A1 773 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 BPHLQ86WA6 291 aaPredicted RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 ZNF433Q8N7K0 673 aaPredicted RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 GALNT11Q8NCW6 608 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR4K14Q8NGD5 310 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR52E2Q8NGJ4 325 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR2T4Q8NH00 348 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RPS6KB2Q9UBS0 482 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 TRAV1-2A0A0B4J238 106 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 TRBV2A0A0J9YWF9 115 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR5K3A6NET4 321 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 LRRC72A6NJI9 287 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 IDSB3KWA1 339 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 PTP4A3O75365 173 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 PEX14O75381 377 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RGS11O94810 467 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 ALDOBP05062 364 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 UGT2B7P16662 529 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 CMPK1P30085 196 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 CCR9P51686 369 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RAB14P61106 215 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RPS11P62280 158 aaKnown RBP eCLIP10.51□□□□□ -0.73
SRP54-213ENST00000556994 RUNX2Q13950 521 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 AMZ1Q400G9 498 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 STPG1Q5TH74 334 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 SLC22A10Q63ZE4 541 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 TMPRSS11FQ6ZWK6 438 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 FGD2Q7Z6J4 655 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 ZAR1Q86SH2 424 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 RNF113BQ8IZP6 322 aaKnown RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 ZNF619Q8N2I2 560 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR2L13Q8N349 312 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 HDDC3Q8N4P3 179 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 C12orf76Q8N812 135 aaPredicted RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 COX18Q8N8Q8 333 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 OR52I2Q8NH67 350 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 SMIM4Q8WVI0 70 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 ZNRF4Q8WWF5 429 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 ERMAPQ96PL5 475 aaPredicted RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 ZNF559Q9BR84 538 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 C1QTNF7Q9BXJ2 289 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 HDAC8Q9BY41 377 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 HRASLSQ9HDD0 168 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 POT1Q9NUX5 634 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 LYARQ9NX58 379 aaKnown RBP10.51□□□□□ -0.73
SRP54-213ENST00000556994 RDH8Q9NYR8 311 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 PTTG3PQ9NZH4 202 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 ABRACLQ9P1F3 81 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 GNG8Q9UK08 70 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 SPATA2Q9UM82 520 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 SCML1Q9UN30 329 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 STON1Q9Y6Q2 735 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 A0A087WV48 116 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 TBC1D3EA0A087X179 549 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 A0A1W2PP55 124 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 GXYLT2A0PJZ3 443 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 ACOD1A6NK06 481 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 ARPC1BO15143 372 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 ADAM11O75078 769 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 STX11O75558 287 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 GATBO75879 557 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 NGFRP08138 427 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 RRASP10301 218 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 NID1P14543 1247 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 EDNRAP25101 427 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 RAD52P43351 418 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 TNFRSF17Q02223 184 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 PLAURQ03405 335 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 EXOSC7Q15024 291 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 TCTE1Q5JU00 501 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 AGBL4Q5VU57 503 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 SLC25A25Q6KCM7 469 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 UBE2Q1Q7Z7E8 422 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 LSMEM1Q8N8F7 131 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 TEX19Q8NA77 164 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 FAM98AQ8NCA5 519 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 ZNF350Q9GZX5 532 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 NOX4Q9NPH5 578 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CA10Q9NS85 328 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 MAB21L2Q9Y586 359 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 PCDHGA9Q9Y5G4 932 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 A0A1W2PPL8 197 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 P2RX6O15547 441 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 EML2O95834 649 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 AGR2O95994 175 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 CEACAM5P06731 702 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 DBIP07108 87 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 THBS1P07996 1170 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 HIST1H1CP16403 213 aaKnown RBP10.5□□□□□ -0.73
SRP54-213ENST00000556994 GRPRP30550 384 aa10.5□□□□□ -0.73
SRP54-213ENST00000556994 MAT2AP31153 395 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms