RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-206ENST00000556765 A0A087WUU8 490 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SH3D21A4FU49 640 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 DPPA5A6NC42 116 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CCL21O00585 134 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CHP2O43745 196 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NAGAP17050 411 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TBXA2RP21731 343 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CRHBPP24387 322 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FPR3P25089 353 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SLC6A8P48029 635 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CDK5R2Q13319 367 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 EFR3AQ14156 821 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF169Q14929 603 aaPredicted RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SEC23BQ15437 767 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OR1Q1Q15612 314 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 KLHL26Q53HC5 615 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF773Q6PK81 442 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 XKRXQ6PP77 449 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 HSDL2Q6YN16 418 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RASSF6Q6ZTQ3 369 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CPEB2Q7Z5Q1 589 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TGIF2LYQ8IUE0 185 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MISPQ8IVT2 679 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CDK20Q8IZL9 346 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF441Q8N8Z8 693 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IP6K3Q96PC2 410 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SPSB2Q99619 263 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MDFIQ99750 246 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TUBA1CQ9BQE3 449 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CRB3Q9BUF7 120 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NXF5Q9H1B4 397 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PLCXD1Q9NUJ7 323 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RLIMQ9NVW2 624 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RPS6KB2Q9UBS0 482 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 KCNE5Q9UJ90 142 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PCDHGB6Q9Y5F9 930 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PCDHGB5Q9Y5G0 923 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CACNA1CQ13936 2221 aa13□□□□□ -0.33
TRAPPC6B-206ENST00000556765 LOC102723996A0A087X1L8 192 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 A8MUA0 341 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SLC1A7O00341 560 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CSTAP01040 98 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IGF2P01344 180 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CYP4B1P13584 511 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 KLK2P20151 261 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CHMP24386 653 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 RFX3P48380 749 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 GSSP48637 474 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TMED10P49755 219 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 GPR143P51810 404 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SH3BGRP55822 239 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 COPZ1P61923 177 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PLCXD2Q0VAA5 305 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NCF4Q15080 339 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SLX4IPQ5VYV7 408 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ANKRD34AQ69YU3 496 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ZNF614Q8N883 585 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FAM71CQ8NEG0 241 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FAM81AQ8TBF8 368 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 DOK4Q8TEW6 326 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 GTPBP3Q969Y2 492 aaKnown RBP12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 NACC2Q96BF6 587 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 Q96MT0 163 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 WFDC6Q9BQY6 131 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 C12orf10Q9HB07 376 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SLC25A19Q9HC21 320 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FBXO34Q9NWN3 711 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 REV1Q9UBZ9 1251 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SNX5Q9Y5X3 404 aa12.99□□□□□ -0.33
TRAPPC6B-206ENST00000556765 A0A0B4J2E0 115 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 A0A1B0GX12 115 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OR2W5A6NFC9 320 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 OR6C70A6NIJ9 312 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MASP2O00187 686 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 FRS3O43559 492 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 EIF4E2O60573 245 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TPST2O60704 377 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 UTS2O95399 124 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TFAP2AP05549 437 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 UBL4AP11441 157 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MMP11P24347 488 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 EEF1B2P24534 225 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TDGF1P3P51864 188 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SMSP52788 366 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 SOX8P57073 446 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 MVKQ03426 396 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 Q0VFX4 171 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 EXT1Q16394 746 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
TRAPPC6B-206ENST00000556765 CASP12Q6UXS9 341 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms