RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 DAPL1A0PJW8 107 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 SLC35F4A4IF30 521 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 EFCAB7A8K855 629 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 GABRPO00591 440 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 NUDT21O43809 227 aaKnown RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 DUX1O43812 170 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 WISP1O95388 367 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 FBLP22087 321 aaKnown RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 PAICSP22234 425 aaKnown RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 MST1P26927 711 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 SLC6A6P31641 620 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 GALNSP34059 522 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF85Q03923 595 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ZP2Q05996 745 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 SKP2Q13309 424 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF79Q15937 498 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 TMEM91Q6ZNR0 172 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 C9orf40Q8IXQ3 194 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 D2HGDHQ8N465 521 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 CAMKK1Q8N5S9 505 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ACBD7Q8N6N7 88 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 MINDY2Q8NBR6 621 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 FAM71CQ8NEG0 241 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 OR7G1Q8NGA0 311 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 OR51L1Q8NGJ5 315 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 OR4C6Q8NH72 309 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ZNRF4Q8WWF5 429 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ADIPOR1Q96A54 375 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 CCDC74AQ96AQ1 378 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 PELOQ9BRX2 385 aaKnown RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 CCDC86Q9H6F5 360 aaKnown RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 MKKSQ9NPJ1 570 aaPredicted RBP9.27□□□□□ -0.92
TMEM260-211ENST00000556648 CTSFQ9UBX1 484 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 CHRNA9Q9UGM1 479 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 MUTYHQ9UIF7 546 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ZMIZ1Q9ULJ6 1067 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 ICAM5Q9UMF0 924 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 MMACHCQ9Y4U1 282 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 IER3IP1Q9Y5U9 82 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 SDK1Q7Z5N4 2213 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 MN1Q10571 1320 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-211ENST00000556648 LOC110117498-PIK3R3F6TDL0 507 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 MAGEB4O15481 346 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-211ENST00000556648 RNF13O43567 381 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 AKAP8O43823 692 aaKnown RBP9.27□□□□□ -0.93
TMEM260-211ENST00000556648 ICOSLGO75144 302 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 OR7A10O76100 309 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 SOX30O94993 753 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 IL33O95760 270 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 DLGAP3O95886 979 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 IGKV3-11P04433 115 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 UBL4AP11441 157 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 GLB1P16278 677 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF3P17036 446 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 HK1P19367 917 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 CXCL12P48061 93 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 E2F1Q01094 437 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 ARHGAP40Q5TG30 622 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 LANCL3Q6ZV70 420 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 CMIPQ8IY22 773 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 MOSPD2Q8NHP6 518 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 PHOSPHO1Q8TCT1 267 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 ZMYND19Q96E35 227 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-211ENST00000556648 DNAJA3Q96EY1 480 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 SLC41A2Q96JW4 573 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 ADOQ96SZ5 270 aa9.27□□□□□ -0.93
TMEM260-211ENST00000556648 DUSP15Q9H1R2 295 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-211ENST00000556648 A0A1W2PQL4 384 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 GTPBP1O00178 669 aaKnown RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SNX4O95219 450 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 TFP02787 698 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SBK2P0C263 348 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PEPDP12955 493 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FGF9P31371 208 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PPICP45877 212 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 GPR143P51810 404 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ACSM1Q08AH1 577 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 GALEQ14376 348 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 AGAP7PQ5VUJ5 663 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FAAH2Q6GMR7 532 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ARHGAP11AQ6P4F7 1023 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 LYPD4Q6UWN0 246 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RPTNQ6XPR3 784 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 TMPRSS11AQ6ZMR5 421 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RTL4Q6ZR62 310 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ATG4DQ86TL0 474 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PLXDC1Q8IUK5 500 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SDR16C5Q8N3Y7 309 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 FAM98AQ8NCA5 519 aaKnown RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 OR5J2Q8NH18 312 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SMPDL3BQ92485 455 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SLC35B4Q969S0 331 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 ZNF501Q96CX3 271 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-211ENST00000556648 RASD2Q96D21 266 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 C4orf36Q96KX1 117 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 SLC46A1Q96NT5 459 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 WDFY2Q96P53 400 aa9.26□□□□□ -0.93
TMEM260-211ENST00000556648 MOGAT1Q96PD6 335 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms