RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 CCDC106Q9BWC9 280 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 POTEKPQ9BYX7 375 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 GSX2Q9BZM3 304 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 OR11A1Q9GZK7 315 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 SAP130Q9H0E3 1048 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 ALG2Q9H553 416 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 CACYBPQ9HB71 228 aaKnown RBP9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 LIPT1Q9Y234 373 aa9.37□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF469Q96JG9 3925 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 FREM1Q5H8C1 2179 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 TMED7-TICAM2A0A0A6YYA0 188 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 PRAMEF27A3QJZ7 478 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ETV2O00321 342 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 AP3D1O14617 1153 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 DNAJA2O60884 412 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 MRPL33O75394 65 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ERLIN1O75477 346 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 SLC22A3O75751 556 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 RAD51DO75771 328 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 KRT75O95678 551 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 PMS2P2O95744 297 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 IL6P05231 212 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 HEXAP06865 529 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 CHRM4P08173 479 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 GUSBP08236 651 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 EDNRAP25101 427 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 FKBP2P26885 142 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 PCSK6P29122 969 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 CDKN1AP38936 164 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 HTR3AP46098 478 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 POLR2HP52434 150 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 WDR4P57081 412 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 MAGOHP61326 146 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 FAPQ12884 760 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 VEZF1Q14119 521 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 COX20Q5RI15 118 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 LRRC74BQ6ZQY2 392 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ATG4DQ86TL0 474 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ADGRG3Q86Y34 549 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 CCDC103Q8IW40 242 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 PEX5LQ8IYB4 626 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 FAM71CQ8NEG0 241 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 KBTBD8Q8NFY9 601 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 OR52N5Q8NH56 324 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 PIGXQ8TBF5 258 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 SMAP2Q8WU79 429 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 CNOT9Q92600 299 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 NEUROG1Q92886 237 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 APH1AQ96BI3 265 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 COX4I2Q96KJ9 171 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 TRNT1Q96Q11 434 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 TMEM204Q9BSN7 226 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 NAA11Q9BSU3 229 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 RMND5AQ9H871 391 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 MANSC1Q9H8J5 431 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 MTHFD2LQ9H903 347 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 EXOSC3Q9NQT5 275 aaKnown RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 TMEM181Q9P2C4 612 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 UPB1Q9UBR1 384 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ING1Q9UK53 422 aaPredicted RBP9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 POU2F3Q9UKI9 436 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 TMED7Q9Y3B3 224 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 HDGFL3Q9Y3E1 203 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 GPR45Q9Y5Y3 372 aa9.36□□□□□ -0.91
SPTLC2-205ENST00000556607 ABCA4P78363 2273 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 A0A1W2PR80 420 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 TMEM72A0PK05 275 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 TMEM247A6NEH6 219 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 DPRXA6NFQ7 191 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 AGAP5A6NIR3 686 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 GPR171O14626 319 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 BCHEP06276 602 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 DBIP07108 87 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 IDO1P14902 403 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CXCR1P25024 350 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 TACR3P29371 465 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CLK1P49759 484 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 TXNL4AP83876 142 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 PPP2R2BQ00005 443 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 KRTAP21-3Q3LHN1 58 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 SLC9B1Q4ZJI4 515 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 TIMM23BQ5SRD1 257 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 C6orf10Q5SRN2 563 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 MRPL2Q5T653 305 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 C9orf135Q5VTT2 229 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 FBXW9Q5XUX1 488 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 ABLIM2Q6H8Q1 611 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CASP12Q6UXS9 341 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CMIPQ8IY22 773 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 CADM2Q8N3J6 435 aa9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 GLB1L3Q8NCI6 653 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 LILRB1Q8NHL6 650 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 PIWIL2Q8TC59 973 aaKnown RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 ZNF75CPQ92670 426 aaPredicted RBP9.35□□□□□ -0.91
SPTLC2-205ENST00000556607 PMM1Q92871 262 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms