RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NUSAP1Q9BXS6 441 aaKnown RBP3.62□□□□□ -1.83
PRPF39-209ENST00000556353 LINC00597Q9H2U6 94 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 DPEP2Q9H4A9 486 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 ASB7Q9H672 318 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 MID1IP1Q9NPA3 183 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 ZDHHC4Q9NPG8 344 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 RBAKQ9NYW8 714 aaPredicted RBP3.62□□□□□ -1.83
PRPF39-209ENST00000556353 HMGXB4Q9UGU5 601 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 IKZF3Q9UKT9 509 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 ZNF346Q9UL40 294 aaKnown RBP3.62□□□□□ -1.83
PRPF39-209ENST00000556353 PAIP2BQ9ULR5 123 aaKnown RBP3.62□□□□□ -1.83
PRPF39-209ENST00000556353 AURKCQ9UQB9 309 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 LRBAP50851 2863 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 ATP8B3O60423 1300 aa3.62□□□□□ -1.83
PRPF39-209ENST00000556353 SPTBN1Q01082 2364 aaKnown RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ITPR2Q14571 2701 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 COL5A1P20908 1838 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 A0A1B0GWJ7 208 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 BCLAF3A2AJT9 711 aaKnown RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 HEATR9A2RTY3 570 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 VPS37CA5D8V6 355 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 LRRIQ3A6PVS8 624 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 FAM220BPB1ANY3 271 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ZNF879B4DU55 563 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 PRSS46E5RG02 174 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 H0YCG3 227 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 K7EQS6 105 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 LRP3O75074 770 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CLN5O75503 358 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 KBTBD11O94819 623 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 KLHL2O95198 593 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ANGPTL1O95841 491 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 RETP07949 1114 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 BMI1P35226 326 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 OPRD1P41143 372 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ACADSBP45954 432 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CBX5P45973 191 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CASP4P49662 377 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 HLCSP50747 726 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 GBX2P52951 348 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 RAD23AP54725 363 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 YBEYP58557 167 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 VBP1P61758 197 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CUL1Q13616 776 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 COTL1Q14019 142 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 MAPK11Q15759 364 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 AANATQ16613 207 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 KYAT1Q16773 422 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 TIMM50Q3ZCQ8 353 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 VWA2Q5GFL6 755 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ERICH5Q6P6B1 374 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 SHQ1Q6PI26 577 aaKnown RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CLEC2AQ6UVW9 174 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 C11orf57Q6ZUT1 292 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ITIH5Q86UX2 942 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 VPS36Q86VN1 386 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 LRRC52Q8N7C0 313 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 KIAA0895Q8NCT3 520 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 SPPL2BQ8TCT7 592 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 C2orf15Q8WU43 125 aaKnown RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 SCFD1Q8WVM8 642 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 PCED1BQ96HM7 432 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ACBD6Q9BR61 282 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 SIKE1Q9BRV8 207 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CENPHQ9H3R5 247 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 SMYD3Q9H7B4 428 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ECT2Q9H8V3 914 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 GORASP2Q9H8Y8 452 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 COPS7BQ9H9Q2 264 aaPredicted RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 PLEKHA3Q9HB20 300 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 RPRD1BQ9NQG5 326 aaKnown RBP3.61□□□□□ -1.83
PRPF39-209ENST00000556353 UBQLN2Q9UHD9 624 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ANAPC5Q9UJX4 755 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 ASB3Q9Y575 518 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 PCDHGA1Q9Y5H4 931 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 COMMD3-BMI1R4GMX3 469 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 CSMD1Q96PZ7 3565 aa3.61□□□□□ -1.83
PRPF39-209ENST00000556353 LRP4O75096 1905 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 ZFC3H1O60293 1989 aaKnown RBP3.6□□□□□ -1.83
PRPF39-209ENST00000556353 TRBV5-4A0A0C4DH59 114 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 A0A0U1RQK1 487 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 ZNF320A2RRD8 509 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 XKRY2A2RUG3 117 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 NCF1BA6NI72 391 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-209ENST00000556353 NCF1CA8MVU1 366 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-209ENST00000556353 F8VP50 259 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 CLDN5O00501 218 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 FBP2O00757 339 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 ANGPT2O15123 496 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 MLNRO43193 412 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 KLRC4O43908 158 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 CACNG3O60359 315 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 FGF19O95750 216 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 OAS1P00973 400 aaKnown RBP3.6□□□□□ -1.83
PRPF39-209ENST00000556353 OPN1LWP04000 364 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 HCKP08631 526 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 ALOX5P09917 674 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 UMPSP11172 480 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 S100A1P23297 94 aa3.6□□□□□ -1.83
PRPF39-209ENST00000556353 IL32P24001 234 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms