RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 EXD2Q9NVH0 621 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 WDR45Q9Y484 360 aa11.71□□□□□ -0.53
TGFB3-204ENST00000556285 PRSS51A0A1B0GVH4 220 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 OR5H1A6NKK0 313 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 E7EQL1 145 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 SERPINE1P05121 402 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 GGT1P19440 569 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 UQCRC2P22695 453 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 APOBEC1P41238 236 aaKnown RBP11.7□□□□□ -0.54
TGFB3-204ENST00000556285 ZNF83P51522 516 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 CDH11P55287 796 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 NME5P56597 212 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 MPP2Q14168 576 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 CASP8Q14790 479 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 SMU1Q2TAY7 513 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 TIMM23BQ5SRD1 257 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 FBXW9Q5XUX1 488 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 B3GLCTQ6Y288 498 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 DTX2Q86UW9 622 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 UBE2J2Q8N2K1 259 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 ANKFN1Q8N957 763 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 OR52N5Q8NH56 324 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 ZNF563Q8TA94 476 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 HTRA1Q92743 480 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 ARL8AQ96BM9 186 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 MUCL1Q96DR8 90 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 USB1Q9BQ65 265 aaKnown RBP11.7□□□□□ -0.54
TGFB3-204ENST00000556285 C1QTNF6Q9BXI9 259 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 CHRNA9Q9UGM1 479 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 PCDHGB4Q9UN71 923 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 B3GALT5Q9Y2C3 310 aa11.7□□□□□ -0.54
TGFB3-204ENST00000556285 GOLGA8QA0A0J9YX86 632 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 GOLGA8OA6NCC3 632 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 GOLGA8NF8WBI6 632 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 HMGN4O00479 90 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SSX4O60224 188 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 GPRIN2O60269 458 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 IL12AP29459 219 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 IDH2P48735 452 aaKnown RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 OR2B6P58173 313 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 CSNK2A1P68400 391 aaPredicted RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 IRX1P78414 480 aaPredicted RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 KCNJ10P78508 379 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 PDK3Q15120 406 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 ETFDHQ16134 617 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SYPL1Q16563 259 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 GPAT3Q53EU6 434 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 ATAD3BQ5T9A4 648 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 C9orf135Q5VTT2 229 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 AP1ARQ63HQ0 302 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 OR52E4Q8NGH9 312 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SLC25A43Q8WUT9 341 aaPredicted RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 APH1AQ96BI3 265 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 TESCQ96BS2 214 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SLC35A5Q9BS91 424 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 INPP5KQ9BT40 448 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 TMEM109Q9BVC6 243 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 NUF2Q9BZD4 464 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 PNPOQ9NVS9 261 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SLC35A3Q9Y2D2 325 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 NOSIPQ9Y314 301 aaKnown RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 RAP2CQ9Y3L5 183 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 SLC25A15Q9Y619 301 aa11.69□□□□□ -0.54
TGFB3-204ENST00000556285 V9GYY5 206 aaPredicted RBP11.69□□□□□ -0.54
TGFB3-204ENST00000556285 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 A0A096LNT2 108 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 CIB4A0PJX0 185 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 TMEM72A0PK05 275 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 CCT8L1PA6NM43 557 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 PMS2P2O95744 297 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 CHRM4P08173 479 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 GUSBP08236 651 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ITGA5P08648 1049 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ALDOCP09972 364 aaKnown RBP11.68□□□□□ -0.54
TGFB3-204ENST00000556285 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 DHRS4L1P0CG22 281 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 IMPDH2P12268 514 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 BGNP21810 368 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 CDKN2CP42773 168 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 SLC1A6P48664 564 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 KHKP50053 298 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 RPL14P50914 215 aaKnown RBP11.68□□□□□ -0.54
TGFB3-204ENST00000556285 UFM1P61960 85 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 FAM174BQ3ZCQ3 159 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ANXA8L1Q5VT79 327 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 C11orf71Q6IPW1 123 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 GRINAQ7Z429 371 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 P2RY8Q86VZ1 359 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 RNF130Q86XS8 419 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ARFGAP2Q8N6H7 521 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
TGFB3-204ENST00000556285 HS6ST2Q96MM7 605 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 SLC38A1Q9H2H9 487 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 ALG2Q9H553 416 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 POLE3Q9NRF9 147 aa11.68□□□□□ -0.54
TGFB3-204ENST00000556285 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms