RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 HCN1O60741 890 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CAPN1P07384 714 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 PNMTP11086 282 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 RNH1P13489 461 aaKnown RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 NTSP30990 170 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 FGF9P31371 208 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 EPHX2P34913 555 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 IFNAR2P48551 515 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CASP4P49662 377 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 HNMTP50135 292 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 PLK1P53350 603 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 STX17P56962 302 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 GNB2P62879 340 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 MAP2K1Q02750 393 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 SLC10A7Q0GE19 358 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 GPM6BQ13491 265 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 IL17AQ16552 155 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 ANKDD1AQ495B1 522 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CCDC152Q4G0S7 254 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 KLF17Q5JT82 389 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 EOGTQ5NDL2 527 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 C1orf220Q5T0J3 134 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 GPRC6AQ5T6X5 926 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 ATAD3BQ5T9A4 648 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 OTPQ5XKR4 325 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 NLRP9Q7RTR0 991 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 ARL6IP6Q8N6S5 226 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 KIR2DL5BQ8NHK3 375 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 TRMT10AQ8TBZ6 339 aaKnown RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 CHCHD10Q8WYQ3 142 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 OR1E3Q8WZA6 343 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 MS4A14Q96JA4 679 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 MAGEB18Q96M61 343 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 TTC25Q96NG3 672 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 NICN1Q9BSH3 213 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 ISG20L2Q9H9L3 353 aaKnown RBP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 NANSQ9NR45 359 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 MARCH5Q9NX47 278 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 AATFQ9NY61 560 aaKnown RBP eCLIP1.96□□□□□ -2.1
SCFD1-218ENST00000556256 RPS6KB2Q9UBS0 482 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 PHF11Q9UIL8 331 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 SNX6Q9UNH7 406 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 PTCH1Q13635 1447 aa1.96□□□□□ -2.1
SCFD1-218ENST00000556256 METTL21EPA6NDL7 271 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 E7ESA3 106 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 KIF2AO00139 706 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 PRKAB2O43741 272 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 OR10H3O60404 316 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 SNNO75324 88 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 RHOBTB1O94844 696 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 LRATO95237 230 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 LGALS2P05162 132 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 ZNF44P15621 663 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 POLR2EP19388 210 aaKnown RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 NPR2P20594 1047 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 IMPDH1P20839 514 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 PTMSP20962 102 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 CALB2P22676 271 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 GLRA2P23416 452 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 YWHABP31946 246 aaKnown RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 MAP3K8P41279 467 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TDO2P48775 406 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 DAP3P51398 398 aaKnown RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 EFNB2P52799 333 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 UBE2HP62256 183 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 CCDC173Q0VFZ6 552 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 CHIT1Q13231 466 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 GRB7Q14451 532 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 SLC15A2Q16348 729 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 CFAP157Q5JU67 520 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 BEND3Q5T5X7 828 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TPGS2Q68CL5 300 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM225Q6GV28 225 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 KCNIP4Q6PIL6 250 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 CCDC137Q6PK04 289 aaKnown RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 ACOT7LQ6ZUV0 252 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 FAM220AQ7Z4H9 259 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM179BQ7Z7N9 219 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TGIF2LYQ8IUE0 185 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM123Q8N131 208 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 OR9A1PQ8NGU1 263 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 SETD7Q8WTS6 366 aaKnown RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TCTEX1D2Q8WW35 142 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 PGLYRP4Q96LB8 373 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 ARHGDIGQ99819 225 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 OR51J1Q9H342 316 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 LRRN3Q9H3W5 708 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 PTGES2Q9H7Z7 377 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 VCPKMTQ9H867 229 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 ZDHHC11Q9H8X9 412 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 GORASP2Q9H8Y8 452 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 APMAPQ9HDC9 416 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 SMPD3Q9NY59 655 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-218ENST00000556256 LCMT1Q9UIC8 334 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TMCC3Q9ULS5 477 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 MEMO1Q9Y316 297 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 TIMM10BQ9Y5J6 103 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 SLCO1B1Q9Y6L6 691 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 PNPLA6Q8IY17 1366 aa1.95□□□□□ -2.1
SCFD1-218ENST00000556256 IGKV1D-8A0A087WSZ0 117 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms