RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SUPT3HB4E1H0 165 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 B9A039 149 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 C9JVG2 144 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 UBXN8O00124 270 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PHGDHO43175 533 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 RIPK2O43353 540 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 RGS14O43566 566 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SUPT3HO75486 399 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 RAD51DO75771 328 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 LTA4HP09960 611 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PGCP20142 388 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SHC1P29353 583 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SSTR1P30872 391 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SFTPDP35247 375 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SERPINF1P36955 418 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ELK3P41970 407 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PIK3CGP48736 1102 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF41P51814 821 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PSMD4P55036 377 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ILF2Q12905 390 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 RIN1Q13671 783 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 TRIP10Q15642 601 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 TMEM176BQ3YBM2 270 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SH2D4BQ5SQS7 431 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SHQ1Q6PI26 577 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SLC46A3Q7Z3Q1 461 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF100Q8IYN0 542 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 WDR31Q8NA23 367 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 OR7G2Q8NG99 324 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 SLC9A6Q92581 669 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF75CPQ92670 426 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 TMEM186Q96B77 213 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 TLCD1Q96CP7 247 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 MUS81Q96NY9 551 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ATOH8Q96SQ7 321 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PSD2Q9BQI7 771 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 FAIM2Q9BWQ8 316 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 RAB1BQ9H0U4 201 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 ALG9Q9H6U8 611 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 UNKLQ9H9P5 680 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 CAB39LQ9H9S4 337 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 HHATLQ9HCP6 504 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 PFDN4Q9NQP4 134 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 MRTO4Q9UKD2 239 aaKnown RBP5.95□□□□□ -1.46
ATXN3-236ENST00000556220 CHMP2BQ9UQN3 213 aa5.95□□□□□ -1.46
ATXN3-236ENST00000556220 TLDC2A0PJX2 215 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 CCT8L1PA6NM43 557 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 GJE1A6NN92 205 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF724A8MTY0 619 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ALG1L2C9J202 215 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF195O14628 629 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 EFNA2O43921 213 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 KERAO60938 352 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 COQ9O75208 318 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 CLDN9O95484 217 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 LINGO3P0C6S8 592 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 MTHFD2P13995 350 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 DAOP14920 347 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 STMN1P16949 149 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 DDX5P17844 614 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ZFP36P26651 326 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 EIF1P41567 113 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ALDH9A1P49189 494 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 KHKP50053 298 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 PPOXP50336 477 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 IDH3GP51553 393 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 RAC3P60763 192 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 RAB10P61026 200 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 UBA52P62987 128 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 TRA2BP62995 288 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 SLC18A2Q05940 514 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 RASGEF1BQ0VAM2 473 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF155Q12901 538 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 CCNIQ14094 377 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 SLC29A2Q14542 456 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 GRAMD1BQ3KR37 738 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 FBXW9Q5XUX1 488 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 FRG2Q64ET8 278 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 OR7E24Q6IFN5 339 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 EMBQ6PCB8 327 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 COMMD6Q7Z4G1 85 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 GALNT5Q7Z7M9 940 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 IFT20Q8IY31 132 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 SAMD14Q8IZD0 417 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 ZNF786Q8N393 782 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 TEX29Q8N6K0 151 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 DTX3Q8N9I9 347 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 TOR1AIP2Q8NFQ8 470 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 NEU4Q8WWR8 484 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 FRG2BQ96QU4 278 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 FMO2Q99518 471 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 JAM3Q9BX67 310 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 PLK3Q9H4B4 646 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 IPPKQ9H8X2 491 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 TMBIM4Q9HC24 238 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 Q9N2J8 555 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 DDX28Q9NUL7 540 aaKnown RBP5.94□□□□□ -1.46
ATXN3-236ENST00000556220 NSMCE4AQ9NXX6 385 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 TRAF6Q9Y4K3 522 aa5.94□□□□□ -1.46
ATXN3-236ENST00000556220 IGHV3-15A0A0B4J1V0 119 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms