RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 APH1AQ96BI3 265 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 DDIT4LQ96D03 193 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 ZG16BQ96DA0 208 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 TRMT61AQ96FX7 289 aaKnown RBP13.68□□□□□ -0.22
SNX6-205ENST00000555648 TMEM204Q9BSN7 226 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 INPP5KQ9BT40 448 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 CCDC106Q9BWC9 280 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 MANSC1Q9H8J5 431 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 LAMP3Q9UQV4 416 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 GPR45Q9Y5Y3 372 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 AKAP9Q99996 3911 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
SNX6-205ENST00000555648 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 AGAP5A6NIR3 686 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 CLDN24A6NM45 220 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 DNPH1O43598 174 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 CNOT4O95628 575 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 PMS2P2O95744 297 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 DBIP07108 87 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 GGT1P19440 569 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 MAGEA8P43361 318 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 POLR2HP52434 150 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 WDR4P57081 412 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 MAGOHP61326 146 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 PDK3Q15120 406 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 PPA1Q15181 289 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 NCMAPQ5T1S8 102 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 DNAJC14Q6Y2X3 702 aaPredicted RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 P2RY8Q86VZ1 359 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 ZNF440Q8IYI8 595 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 CNOT9Q92600 299 aaKnown RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 PMM1Q92871 262 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 DNAJA3Q96EY1 480 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 COX4I2Q96KJ9 171 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
SNX6-205ENST00000555648 CALML5Q9NZT1 146 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 TMEM181Q9P2C4 612 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 P2RX2Q9UBL9 471 aa13.67□□□□□ -0.22
SNX6-205ENST00000555648 TMED7-TICAM2A0A0A6YYA0 188 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 A0A1W2PP18 115 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 CFAP73A6NFT4 308 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 TRIM64A6NGJ6 449 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 TRIM64BA6NI03 449 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 EIF1BO60739 113 aaKnown RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 SNNO75324 88 aaPredicted RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 BCAS1O75363 584 aaPredicted RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 MRPL33O75394 65 aaKnown RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 HEXAP06865 529 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 CHRM4P08173 479 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 HOXB4P17483 251 aaPredicted RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 IL12AP29459 219 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 CDKN2CP42773 168 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 CRATP43155 626 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 SLC18A1P54219 525 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 COPZ1P61923 177 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 SLC35A1P78382 337 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 GSTA3Q16772 222 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 PDCD4Q53EL6 469 aaKnown RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 TIMM23BQ5SRD1 257 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 FBXW9Q5XUX1 488 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 AP1ARQ63HQ0 302 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ABLIM2Q6H8Q1 611 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ADAM5Q6NVV9 412 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ADGRG3Q86Y34 549 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 PIWIL2Q8TC59 973 aaKnown RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 ARL5BQ96KC2 179 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 OR11A1Q9GZK7 315 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 SLC38A1Q9H2H9 487 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ALG2Q9H553 416 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ARMC7Q9H6L4 198 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 ING1Q9UK53 422 aaPredicted RBP13.66□□□□□ -0.22
SNX6-205ENST00000555648 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
SNX6-205ENST00000555648 IGKV3D-15A0A087WSY6 115 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 PRAMEF27A3QJZ7 478 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 UBDO15205 165 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 IGHV3-9P01782 118 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 IGHV1-2P23083 117 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 TACR3P29371 465 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 SLC1A3P43003 542 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 MAP2K6P52564 334 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 CRISP3P54108 245 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 BSPH1Q075Z2 132 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 LIN52Q52LA3 116 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 COX20Q5RI15 118 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 C6orf10Q5SRN2 563 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 MRPL2Q5T653 305 aaKnown RBP13.65□□□□□ -0.22
SNX6-205ENST00000555648 SMAP2Q8WU79 429 aaPredicted RBP13.65□□□□□ -0.22
SNX6-205ENST00000555648 ZNF75CPQ92670 426 aaPredicted RBP13.65□□□□□ -0.22
SNX6-205ENST00000555648 ITCHQ96J02 903 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 ZNF701Q9NV72 531 aaPredicted RBP13.65□□□□□ -0.22
SNX6-205ENST00000555648 FAIMQ9NVQ4 179 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 PARPBPQ9NWS1 579 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 THUMPD1Q9NXG2 353 aaKnown RBP13.65□□□□□ -0.22
SNX6-205ENST00000555648 ZIM2Q9NZV7 527 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 UPB1Q9UBR1 384 aa13.65□□□□□ -0.22
SNX6-205ENST00000555648 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms