RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RPH3AQ9Y2J0 694 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-220ENST00000555634 TMED7Q9Y3B3 224 aa10.16□□□□□ -0.78
SHMT2-220ENST00000555634 FREM3P0C091 2139 aa10.16□□□□□ -0.78
SHMT2-220ENST00000555634 PCNX3Q9H6A9 2034 aa10.16□□□□□ -0.78
SHMT2-220ENST00000555634 CNTRLQ7Z7A1 2325 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 SH3PXD2BA1X283 911 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 H3BML4 177 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 TAF4O00268 1085 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PRSS23O95084 383 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 HIST1H2ABP04908 130 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 HPNP05981 417 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 IFI30P13284 250 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 IGFBP5P24593 272 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PEX2P28328 305 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 IDUAP35475 653 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 VHLP40337 213 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 MAGEA5P43359 124 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 CLK1P49759 484 aaKnown RBP10.15□□□□□ -0.78
SHMT2-220ENST00000555634 IL1RL1Q01638 556 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PLAURQ03405 335 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 CRYZQ08257 329 aaKnown RBP10.15□□□□□ -0.78
SHMT2-220ENST00000555634 SLC10A1Q14973 349 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 SLC25A53Q5H9E4 307 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 RPL13AP3Q6NVV1 102 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 RPUSD3Q6P087 351 aaKnown RBP10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PODNL1Q6PEZ8 512 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 HIST3H2AQ7L7L0 130 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 CHMP1BQ7LBR1 199 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 AQP11Q8NBQ7 271 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 FAM83FQ8NEG4 500 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-220ENST00000555634 SLC7A13Q8TCU3 470 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 STK35Q8TDR2 534 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 HIST1H2ACQ93077 130 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PSD2Q9BQI7 771 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 ASPNQ9BXN1 380 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 MFRPQ9BY79 579 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PRRG3Q9BZD7 231 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 GABARAPL1Q9H0R8 117 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PRORYQ9H606 182 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 PROK2Q9HC23 129 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 TIGARQ9NQ88 270 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 OSGIN1Q9UJX0 560 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 NTNG1Q9Y2I2 539 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 AP4B1Q9Y6B7 739 aa10.15□□□□□ -0.78
SHMT2-220ENST00000555634 FASNP49327 2511 aaKnown RBP10.15□□□□□ -0.78
SHMT2-220ENST00000555634 TRAV36DV7A0A075B6V5 113 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 TRBV4-1A0A0J9YWV2 114 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 FFAR1O14842 300 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CASQ2O14958 399 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 GLSO94925 669 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 OR6A2O95222 327 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ACTL6AO96019 429 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 MT-ATP6P00846 226 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 IGF2P01344 180 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CCNA2P20248 432 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CHMP24386 653 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 RFC3P40938 356 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 PTDSS1P48651 473 aaKnown RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ALDH3A2P51648 485 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 HMGA2P52926 109 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 DLX5P56178 289 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 RPS3AP61247 264 aaKnown RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CSNK2A1P68400 391 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 DAG1Q14118 895 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ST3GAL2Q16842 350 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 LRRC36Q1X8D7 754 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 SYT14P1Q58G82 188 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 SLC6A19Q695T7 634 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 HMBOX1Q6NT76 420 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 NANOGNBQ7Z5D8 188 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 NRMQ8IXM6 262 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 LILRA2Q8N149 483 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CBR4Q8N4T8 237 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 MEIOBQ8N635 442 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 TMEM251Q8N6I4 163 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ATP6V1C2Q8NEY4 427 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 OR52L1Q8NGH7 329 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 GNPDA2Q8TDQ7 276 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 SMPDL3BQ92485 455 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 BPIFA2Q96DR5 249 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 SGTBQ96EQ0 304 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 RDH12Q96NR8 316 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 WFDC6Q9BQY6 131 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 PRR14Q9BWN1 585 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ADAM19Q9H013 955 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 UBQLN3Q9H347 655 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 Q9H521 79 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF71Q9NQZ8 489 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 PAPOLBQ9NRJ5 636 aaKnown RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 PAQR5Q9NXK6 330 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-220ENST00000555634 CSAG2Q9Y5P2 127 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 FRYQ5TBA9 3013 aa10.14□□□□□ -0.79
SHMT2-220ENST00000555634 TRGV5A0A0B4J1U4 118 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 OR2M5A3KFT3 312 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 PINLYPA6NC86 204 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ENO4A6NNW6 628 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 C17orf51A8MQB3 221 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 EFCAB9A8MZ26 197 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ETV2O00321 342 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 EI24O14681 340 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms