RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.26□□□□□ -0.93
SRP54-208ENST00000555557 DKK4Q9UBT3 224 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 MGAT4BQ9UQ53 548 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 RPH3AQ9Y2J0 694 aaPredicted RBP9.26□□□□□ -0.93
SRP54-208ENST00000555557 MED31Q9Y3C7 131 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ORC6Q9Y5N6 252 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 MGAQ8IWI9 3026 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 ZC3H12DA2A288 527 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 RRP8O43159 456 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 TRIM3O75382 744 aaPredicted RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 ADAP00813 363 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 RFPL3SP0C7P2 107 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 IL11P20809 199 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 CXCR1P25024 350 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 GSSP48637 474 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 ZNF41P51814 821 aaPredicted RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 RAD23AP54725 363 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 SUMO3P55854 103 aaPredicted RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 EGR4Q05215 589 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 CRYZQ08257 329 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 FOXF1Q12946 379 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 PLPPR5Q32ZL2 321 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 CMPK2Q5EBM0 449 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 GRINAQ7Z429 371 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 SULF2Q8IWU5 870 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 LINC00471Q8N535 108 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 DHRSXQ8N5I4 330 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 ATP6V1C2Q8NEY4 427 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 POC1BQ8TC44 478 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 HAS2Q92819 552 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 C1GALT1C1Q96EU7 318 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TMEM41AQ96HV5 264 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 HS6ST2Q96MM7 605 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 DGCR6LQ9BY27 220 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 UCK2Q9BZX2 261 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 PTGES2Q9H7Z7 377 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 RYDENQ9NUL5 291 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 FAM118AQ9NWS6 357 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TUBA8Q9NY65 449 aaPredicted RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 REV1Q9UBZ9 1251 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 PCDHGB5Q9Y5G0 923 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 EPG5Q9HCE0 2579 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TMED7-TICAM2A0A0A6YYA0 188 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TMEM72A0PK05 275 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 LRRC3CA6NJW4 275 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 OPN1LWP04000 364 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 SP1P08047 785 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 PNMTP11086 282 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 DPP4P27487 766 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 POU1F1P28069 291 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 IFNGR2P38484 337 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 RBM34P42696 430 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 CD97P48960 835 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 POLR2HP52434 150 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 ADARB1P78563 741 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 PRKCDQ05655 676 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 NPRL3Q12980 569 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TOMM20Q15388 145 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 SLC36A3Q495N2 470 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 C1QL3Q5VWW1 255 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 GALNTL5Q7Z4T8 443 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 RNF113BQ8IZP6 322 aaKnown RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 MDS2Q8NDY4 140 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 OR2M7Q8NG81 312 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 GNPDA2Q8TDQ7 276 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TMEM234Q8WY98 164 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 BPIFA2Q96DR5 249 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 KTI12Q96EK9 354 aaPredicted RBP9.25□□□□□ -0.93
SRP54-208ENST00000555557 CNBD2Q96M20 576 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 RAB26Q9ULW5 256 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 POFUT2Q9Y2G5 429 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 TMED7Q9Y3B3 224 aa9.25□□□□□ -0.93
SRP54-208ENST00000555557 LOC100130705A0A1B0GUX0 176 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TAF4O00268 1085 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 KLF4O43474 513 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 EFNA2O43921 213 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 SUSD5O60279 629 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 CBR3O75828 277 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 CEACAM4O75871 244 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 CH25HO95992 272 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TP53P04637 393 aaPredicted RBP9.24□□□□□ -0.93
SRP54-208ENST00000555557 CAPGP40121 348 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 HSPA13P48723 471 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 FOXO1Q12778 655 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TSPAN31Q12999 210 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 RFX4Q33E94 735 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TMEM236Q5W0B7 351 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 SLC25A25Q6KCM7 469 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 KIF18BQ86Y91 864 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 LRRC17Q8N6Y2 441 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 ST8SIA1Q92185 356 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 UBL7Q96S82 380 aaPredicted RBP9.24□□□□□ -0.93
SRP54-208ENST00000555557 GRIP2Q9C0E4 1043 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 OR11A1Q9GZK7 315 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 EGLN3Q9H6Z9 239 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TMEM185BQ9H7F4 350 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 IL20RAQ9UHF4 553 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 IGF2RP11717 2491 aa9.24□□□□□ -0.93
SRP54-208ENST00000555557 TRAV27A0A087WT01 109 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms