RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 VITQ6UXI7 678 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HIST3H2AQ7L7L0 130 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 MEIOBQ8N635 442 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ACOT4Q8N9L9 421 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CAMKVQ8NCB2 501 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 BBS1Q8NFJ9 593 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 OR52L1Q8NGH7 329 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 OR52E1Q8NGJ3 308 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 OR5D16Q8NGK9 328 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 LILRB1Q8NHL6 650 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PCNPQ8WW12 178 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HIST1H2ACQ93077 130 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 MARC2Q969Z3 335 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PGLYRP3Q96LB9 341 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 NRTNQ99748 197 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HRASLSQ9HDD0 168 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CTPS2Q9NRF8 586 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HAO2Q9NYQ3 351 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 KCNK7Q9Y2U2 307 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 COLEC10Q9Y6Z7 277 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HEATR5BQ9P2D3 2071 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 LAMA2P24043 3122 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 A0A1W2PR48 441 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 D6RAR5 112 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PDCD5O14737 125 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ERI3O43414 337 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SUSD5O60279 629 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 TOXO94900 526 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CH25HO95992 272 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PAK4O96013 591 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HRGP04196 525 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CEACAM5P06731 702 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 GLULP15104 373 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 GCGRP47871 477 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PSMA6P60900 246 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SEC61A1P61619 476 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 FUT5Q11128 374 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HTR4Q13639 388 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 UBXN2BQ14CS0 331 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CEBPEQ15744 281 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ACSM3Q53FZ2 586 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CLVS2Q5SYC1 327 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PRPF38BQ5VTL8 546 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 OR2L3Q8NG85 312 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ORAI1Q96D31 301 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ZFP3Q96NJ6 502 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 GSDMCQ9BYG8 508 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 AICDAQ9GZX7 198 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC25A32Q9H2D1 315 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 UBQLN3Q9H347 655 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 KLHL31Q9H511 634 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 XKR8Q9H6D3 395 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 KIR3DX1Q9H7L2 352 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 KCNK12Q9HB15 430 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 KLHL9Q9P2J3 617 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CES1P1Q9UKY3 287 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 PCDHGA9Q9Y5G4 932 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 COL4A3Q01955 1670 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 A0A0G2JN53 185 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 A0A1W2PP55 124 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 FAM86C2PA6NEL3 165 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 SELENOFO60613 162 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 ERAL1O75616 437 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 KRT33AO76009 404 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 AGR2O95994 175 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 EGFP01133 1207 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 HMGN2P05204 90 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 LPLP06858 475 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 PROS1P07225 676 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 F3P13726 295 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 ATF1P18846 271 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 NT5EP21589 574 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 NDUFS1P28331 727 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 DLX5P56178 289 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 GAS6Q14393 721 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 ETFDHQ16134 617 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 RPE65Q16518 533 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 LRFN4Q6PJG9 635 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 Q6ZTK2 550 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 SPRED2Q7Z698 418 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 RNF113BQ8IZP6 322 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC43A2Q8N370 569 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 LNX2Q8N448 690 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 OR5M9Q8NGP3 310 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 PNPLA2Q96AD5 504 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 CXorf58Q96LI9 332 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC6A17Q9H1V8 727 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 KLHL1Q9NR64 748 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 KCNK6Q9Y257 313 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 ZNF780BQ9Y6R6 833 aa9.88□□□□□ -0.83
MTHFD1-210ENST00000555252 CPSF4LA6NMK7 179 aaKnown RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 OGG1O15527 345 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 PTP4A3O75365 173 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 AIFM1O95831 613 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 ADRB1P08588 477 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 HOXC4P09017 264 aaPredicted RBP9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 UCHL1P09936 223 aa9.87□□□□□ -0.83
MTHFD1-210ENST00000555252 H2AFB1P0C5Y9 115 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms