RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SLITRK3O94933 977 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 HSPB1P04792 205 aaKnown RBP3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 ANXA13P27216 316 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 LEPP41159 167 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 DAP3P51398 398 aaKnown RBP3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 HSPA2P54652 639 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 FGL1Q08830 312 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 CCDC173Q0VFZ6 552 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 ELAVL3Q14576 367 aaKnown RBP3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 DPYSL2Q16555 572 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 FHL5Q5TD97 284 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 TPGS2Q68CL5 300 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 KDELC1Q6UW63 502 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 ARCQ7LC44 396 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 LCA5Q86VQ0 697 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 SLC35F2Q8IXU6 374 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 C14orf178Q8N769 122 aaPredicted RBP3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 OR10H4Q8NGA5 316 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 PAQR8Q8TEZ7 354 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 B3GALT6Q96L58 329 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 MAGEB18Q96M61 343 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF670Q9BS34 389 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 RAB18Q9NP72 206 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 SMOXQ9NWM0 555 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 COX16Q9P0S2 106 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 TMEM9Q9P0T7 183 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 PTBP2Q9UKA9 531 aaKnown RBP3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 DISP1Q96F81 1524 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 KDM5BQ9UGL1 1544 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 CLSPNQ9HAW4 1339 aa3.93□□□□□ -1.78
CKS1BP1-201ENST00000555221 ABCC10Q5T3U5 1492 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TEX14Q8IWB6 1497 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TRAV26-1A0A087WT03 109 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TUBAL3A6NHL2 446 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZFP92A6NM28 416 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TRDCB7Z8K6 153 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 HAT1O14929 419 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF208O43345 1280 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 LY6G6DO95868 133 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 IGHG4P01861 327 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 LGALS2P05162 132 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 CCDC130P13994 396 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 POLR2EP19388 210 aaKnown RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 EFNB2P52799 333 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 C1orf61Q13536 156 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ARL6IP1Q15041 203 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 KYAT1Q16773 422 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 HSD17B13Q7Z5P4 300 aaPredicted RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF589Q86UQ0 364 aaPredicted RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF584Q8IVC4 421 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF679Q8IYX0 411 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZCCHC7Q8N3Z6 543 aaKnown RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 FBXL16Q8N461 479 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF606Q8WXB4 792 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 SLC41A3Q96GZ6 507 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 CNOT6LQ96LI5 555 aaKnown RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 RPRD1AQ96P16 312 aaPredicted RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 RBM14Q96PK6 669 aaKnown RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 NICN1Q9BSH3 213 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TMEM43Q9BTV4 400 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 NMUR2Q9GZQ4 415 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 UBQLN1Q9UMX0 589 aaKnown RBP3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 COPS3Q9UNS2 423 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 TIMM10BQ9Y5J6 103 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 CD109Q6YHK3 1445 aa3.92□□□□□ -1.78
CKS1BP1-201ENST00000555221 MAPKBP1O60336 1514 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 SYNJ2BP-COX16A0A087WUM0 186 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 POLR2DO15514 142 aaKnown RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RIPK2O43353 540 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 LYPD3O95274 346 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 COX5AP20674 150 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 GCAP28676 217 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RPL13AP40429 203 aaKnown RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 MAP3K8P41279 467 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 BTDP43251 543 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 CASP4P49662 377 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RPS8P62241 208 aaKnown RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 UBE2HP62256 183 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZNF45Q02386 682 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RIPK1Q13546 671 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 EOGTQ5NDL2 527 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 C9orf129Q5T035 196 aaKnown RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 ZSCAN25Q6NSZ9 544 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 GDPD3Q7L5L3 318 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 TMEM179BQ7Z7N9 219 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 C11orf42Q8N5U0 333 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 HTR3CQ8WXA8 447 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RAPGEF5Q92565 580 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 PSKH2Q96QS6 385 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 SLC39A3Q9BRY0 314 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RNF126Q9BV68 326 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 RAB34Q9BZG1 259 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 POPDC2Q9HBU9 364 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 B4GALT7Q9UBV7 327 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 CDH9Q9ULB4 789 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 PRPF19Q9UMS4 504 aaKnown RBP3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 POLDIP2Q9Y2S7 368 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 MEMO1Q9Y316 297 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 ATP10BO94823 1461 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms