RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 CD6P30203 668 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 OPRD1P41143 372 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 RTL6Q6ICC9 239 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF765Q7L2R6 523 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 IL17RDQ8NFM7 739 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 SLC38A5Q8WUX1 472 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 KHSRPQ92945 711 aaKnown RBP eCLIP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF578Q96N58 590 aaPredicted RBP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 CENPOQ9BU64 300 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF160Q9HCG1 818 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 SEC14L5O43304 696 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 P2RY2P41231 377 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 RPS25P62851 125 aaKnown RBP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 CXADRP78310 365 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 NTHL1P78549 312 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 CAMK2DQ13557 499 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 APOOLQ6UXV4 268 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 NLRP8Q86W28 1048 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 TM9SF4Q92544 642 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF681Q96N22 645 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 TCEAL2Q9H3H9 227 aaPredicted RBP13.04□□□□□ -0.32
VTI1B-204ENST00000554659 PLEKHJ1Q9NW61 149 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 QPCTLQ9NXS2 382 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 ASIC5Q9NY37 505 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 KLHL13Q9P2N7 655 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 DOT1LQ8TEK3 1739 aa13.04□□□□□ -0.32
VTI1B-204ENST00000554659 LDB3O75112 727 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SMIM18P0DKX4 95 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 MTNR1BP49286 362 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 PRDX1Q06830 199 aaKnown RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SBSNQ6UWP8 590 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 OR6V1Q8N148 313 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SMAP2Q8WU79 429 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 FCRL1Q96LA6 429 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 KIR2DS5A0A0G2JLQ3 304 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 A0A0G2JNG1 304 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 KIR2DS3K7RE56 304 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF217O75362 1048 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SEMA3BQ13214 749 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 KIR2DS5Q14953 304 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 PRR18Q8N4B5 295 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF582Q96NG8 517 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 UHRF1Q96T88 793 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SUSD2Q9UGT4 822 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SLC22A7Q9Y694 548 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 PRICKLE3O43900 615 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 DEFA6Q01524 100 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 BEX5Q5H9J7 111 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 HENMT1Q5T8I9 393 aaKnown RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SLC22A25Q6T423 547 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 LYPD4Q6UWN0 246 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 LKAAEAR1Q8TD35 194 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 HAS2Q92819 552 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SNX18Q96RF0 628 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 MACROD1Q9BQ69 325 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 A0A0A6YYC8 382 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 METTL15A6NJ78 407 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 I3L1I5 382 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 NCR1O76036 304 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 AFF3P51826 1226 aaKnown RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 LACC1Q8IV20 430 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 OR5K2Q8NHB8 316 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 ST7LQ8TDW4 575 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 RLIMQ9NVW2 624 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 CBLCQ9ULV8 474 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 PIAS3Q9Y6X2 628 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 EFCAB7A8K855 629 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 PIP5K1CO60331 668 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SLC43A1O75387 559 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 GPR75O95800 540 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 FURINP09958 794 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 IMPA1P29218 277 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 KCNJ10P78508 379 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 CCNJQ5T5M9 372 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 IL20RBQ6UXL0 311 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 TMEM184AQ6ZMB5 413 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF761Q86XN6 746 aaPredicted RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 MRPL41Q8IXM3 137 aaKnown RBP13.03□□□□□ -0.32
VTI1B-204ENST00000554659 OR5H6Q8NGV6 325 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 RNF128Q8TEB7 428 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 SIAEQ9HAT2 523 aa13.03□□□□□ -0.32
VTI1B-204ENST00000554659 CRYBG1Q9Y4K1 1723 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 K7EPK0 472 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 RRAS2P62070 204 aaPredicted RBP13.02□□□□□ -0.32
VTI1B-204ENST00000554659 GPR18Q14330 331 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.32
VTI1B-204ENST00000554659 RTL10Q7L3V2 364 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 FCRLAQ7L513 359 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 TRAPPC6BQ86SZ2 158 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 NLGN4XQ8N0W4 816 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 ZNF808Q8N4W9 903 aaPredicted RBP13.02□□□□□ -0.32
VTI1B-204ENST00000554659 FAM71E2Q8N5Q1 922 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 STEAP2Q8NFT2 490 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 TERB2Q8NHR7 220 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 RBM24Q9BX46 236 aaKnown RBP13.02□□□□□ -0.32
VTI1B-204ENST00000554659 POU2F3Q9UKI9 436 aa13.02□□□□□ -0.32
VTI1B-204ENST00000554659 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.02□□□□□ -0.33
VTI1B-204ENST00000554659 AIFM1O95831 613 aa13.02□□□□□ -0.33
VTI1B-204ENST00000554659 MAGEB1P43366 347 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms