RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 COQ10BQ9H8M1 238 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 RLIMQ9NVW2 624 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 CLEC4AQ9UMR7 237 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 TRAPPC4Q9Y296 219 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 KIAA1549Q9HCM3 1950 aa13.7□□□□□ -0.22
SHMT2-204ENST00000553324 SH3D21A4FU49 640 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 A6NNC1 897 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 ENO4A6NNW6 628 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 SERPINB7O75635 380 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 PMS2P2O95744 297 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 NPPAP01160 153 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 TACR3P29371 465 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 PRKAR1BP31321 381 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 UGT2B10P36537 528 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 PLAURQ03405 335 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 RBBP4Q09028 425 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-204ENST00000553324 MAPRE2Q15555 327 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 RPS26P11Q5JNZ5 115 aaPredicted RBP13.69□□□□□ -0.22
SHMT2-204ENST00000553324 WBP2NLQ6ICG8 309 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 ZNF836Q6ZNA1 936 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 DHDDSQ86SQ9 333 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 ABHD3Q8WU67 409 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 CGREF1Q99674 301 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 SH3GL1Q99961 368 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 EVA1AQ9H8M9 152 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 RASSF1Q9NS23 344 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 KLHL14Q9P2G3 628 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 OSGIN1Q9UJX0 560 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 CSMD1Q96PZ7 3565 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 FBN2P35556 2912 aa13.69□□□□□ -0.22
SHMT2-204ENST00000553324 TMED7-TICAM2A0A0A6YYA0 188 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 AP3D1O14617 1153 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 EIF1BO60739 113 aaKnown RBP13.68□□□□□ -0.22
SHMT2-204ENST00000553324 CYTIPO60759 359 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 ADAM11O75078 769 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 PPP3CBP16298 524 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 CXCR1P25024 350 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 AGTR1P30556 359 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 ACAA2P42765 397 aaKnown RBP13.68□□□□□ -0.22
SHMT2-204ENST00000553324 RASGEF1BQ0VAM2 473 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 NFYCQ13952 458 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 SCARB2Q14108 478 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 PDK3Q15120 406 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 COQ5Q5HYK3 327 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 FBXW10Q5XX13 1052 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 MED12LQ86YW9 2145 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 SLC30A8Q8IWU4 369 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 TUSC5Q8IXB3 177 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 CLIP4Q8N3C7 705 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 HIPK4Q8NE63 616 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 NFKBIDQ8NI38 313 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 HDHD5Q9BXW7 423 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 POLDIP3Q9BY77 421 aaKnown RBP13.68□□□□□ -0.22
SHMT2-204ENST00000553324 BCO1Q9HAY6 547 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 TMED7Q9Y3B3 224 aa13.68□□□□□ -0.22
SHMT2-204ENST00000553324 ABCA12Q86UK0 2595 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 ZNF724A8MTY0 619 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 BBIP1A8MTZ0 92 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 SLC22A2O15244 555 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 GKN3PP0CG01 181 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 CD1EP15812 388 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 KRTAP10-9P60411 292 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 SLC35A1P78382 337 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 EXOC3L2Q2M3D2 409 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SHMT2-204ENST00000553324 CPPED1Q9BRF8 314 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-204ENST00000553324 GPATCH1Q9BRR8 931 aaKnown RBP13.67□□□□□ -0.22
SHMT2-204ENST00000553324 NAA11Q9BSU3 229 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-204ENST00000553324 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 OR10A4Q9H209 315 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 CLEC4MQ9H2X3 399 aaPredicted RBP13.67□□□□□ -0.22
SHMT2-204ENST00000553324 SAR1AQ9NR31 198 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 KLHL28Q9NXS3 571 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 EMC3Q9P0I2 261 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 SLC13A4Q9UKG4 626 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 ANGPT4Q9Y264 503 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
SHMT2-204ENST00000553324 CREBBPQ92793 2442 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 GPR171O14626 319 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 FESP07332 822 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 CCNA2P20248 432 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 OR2B6P58173 313 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 KLF10Q13118 480 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 ADRM1Q16186 407 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 CYP51A1Q16850 503 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 DHRS4L2Q6PKH6 230 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 SERPINA11Q86U17 422 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 RETREG3Q86VR2 466 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 CADM2Q8N3J6 435 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
SHMT2-204ENST00000553324 PIGXQ8TBF5 258 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms