RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 GRINAQ7Z429 371 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 ADGRG3Q86Y34 549 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 KRTAP1-3Q8IUG1 177 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 P3H2Q8IVL5 708 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 SLC25A43Q8WUT9 341 aaPredicted RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 WDR60Q8WVS4 1066 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 VPS33AQ96AX1 596 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 THOC1Q96FV9 657 aaKnown RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 AURKBQ96GD4 344 aaPredicted RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 ARL5BQ96KC2 179 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 TACO1Q9BSH4 297 aaKnown RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 CCDC28BQ9BUN5 200 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 HDHD5Q9BXW7 423 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 OR10A4Q9H209 315 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 DLL4Q9NR61 685 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 SPIN1Q9Y657 262 aaPredicted RBP14.1□□□□□ -0.15
CDK4-215ENST00000553237 FREM1Q5H8C1 2179 aa14.1□□□□□ -0.15
CDK4-215ENST00000553237 OR3A2P47893 321 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 OR2B6P58173 313 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 STX1BP61266 288 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 CAPRIN1Q14444 709 aaKnown RBP14.09□□□□□ -0.15
CDK4-215ENST00000553237 MAPK11Q15759 364 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 HSP90B2PQ58FF3 399 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 C6orf10Q5SRN2 563 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 MRPL2Q5T653 305 aaKnown RBP14.09□□□□□ -0.15
CDK4-215ENST00000553237 C20orf204Q6ZNR8 217 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 MTDHQ86UE4 582 aaKnown RBP14.09□□□□□ -0.15
CDK4-215ENST00000553237 CMIPQ8IY22 773 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 KISS1RQ969F8 398 aaPredicted RBP14.09□□□□□ -0.15
CDK4-215ENST00000553237 ITCHQ96J02 903 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 PIP5K1AQ99755 562 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 RMND5AQ9H871 391 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 RLIMQ9NVW2 624 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
CDK4-215ENST00000553237 FLNAP21333 2647 aaKnown RBP14.09□□□□□ -0.15
CDK4-215ENST00000553237 TMED7-TICAM2A0A0A6YYA0 188 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ZNF724A8MTY0 619 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ARHGEF9O43307 516 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 EDF1O60869 148 aaKnown RBP14.08□□□□□ -0.16
CDK4-215ENST00000553237 LYZL6O75951 148 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 DBIP07108 87 aaKnown RBP14.08□□□□□ -0.16
CDK4-215ENST00000553237 RPS4Y1P22090 263 aaKnown RBP14.08□□□□□ -0.16
CDK4-215ENST00000553237 MVDP53602 400 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 NR1H2P55055 460 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ITGADQ13349 1161 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 GNA13Q14344 377 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 P2RY6Q15077 328 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 TAB1Q15750 504 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 SHEQ5VZ18 495 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 Q6ZT83 130 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 BHLHA15Q7RTS1 189 aaPredicted RBP14.08□□□□□ -0.16
CDK4-215ENST00000553237 GALNT5Q7Z7M9 940 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 VRK2Q86Y07 508 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 CCDC103Q8IW40 242 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 PEX5LQ8IYB4 626 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ZNF100Q8IYN0 542 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 OR52P1PQ8NH57 321 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ZHX1-C8orf76Q96EF9 292 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 PERPQ96FX8 193 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 TPT1P8Q9HAU6 139 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 P2RX2Q9UBL9 471 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 DCTN4Q9UJW0 460 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 OSGIN1Q9UJX0 560 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 TMED7Q9Y3B3 224 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 HDGFL3Q9Y3E1 203 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 ARID1AO14497 2285 aa14.08□□□□□ -0.16
CDK4-215ENST00000553237 TMEM72A0PK05 275 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 FAM234BA2RU67 622 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 CFAP73A6NFT4 308 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 RAMP1O60894 148 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 PMS2P2O95744 297 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 BCHEP06276 602 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 GKN3PP0CG01 181 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 ZCCHC18P0CG32 403 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 FOSL1P15407 271 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 TACR3P29371 465 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 HTR3AP46098 478 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 MRPL19P49406 292 aaKnown RBP14.07□□□□□ -0.16
CDK4-215ENST00000553237 POLR2HP52434 150 aaKnown RBP14.07□□□□□ -0.16
CDK4-215ENST00000553237 DSTNP60981 165 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 STK11Q15831 433 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 RPS26P11Q5JNZ5 115 aaPredicted RBP14.07□□□□□ -0.16
CDK4-215ENST00000553237 Q5PR19 223 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 ABLIM2Q6H8Q1 611 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 SLC2A7Q6PXP3 512 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 ATG4DQ86TL0 474 aaPredicted RBP14.07□□□□□ -0.16
CDK4-215ENST00000553237 SLC38A5Q8WUX1 472 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 SMR3AQ99954 134 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 NPHS2Q9NP85 383 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 MED4Q9NPJ6 270 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 DSCAMO60469 2012 aa14.07□□□□□ -0.16
CDK4-215ENST00000553237 VPS13CQ709C8 3753 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 ZNF716A6NP11 495 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 CLOCKO15516 846 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 IGHV3-9P01782 118 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 TFPTP0C1Z6 253 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 IGHV1-2P23083 117 aa14.06□□□□□ -0.16
CDK4-215ENST00000553237 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
CDK4-215ENST00000553237 SLC1A3P43003 542 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms