RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 PTGDSP41222 190 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 SOX3P41225 446 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 C17orf67Q0P5P2 114 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 COL28A1Q2UY09 1125 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 SMARCD3Q6STE5 483 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 SLC46A3Q7Z3Q1 461 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 ARMC10Q8N2F6 343 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 TMEM163Q8TC26 289 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 SGTBQ96EQ0 304 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 SLC38A2Q96QD8 506 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 TNFRSF13CQ96RJ3 184 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 GPR87Q9BY21 358 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 B3GNT4Q9C0J1 378 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 MCCC2Q9HCC0 563 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 OSGIN1Q9UJX0 560 aa17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 ZFHX2Q9C0A1 2572 aaPredicted RBP17.81■□□□□ 0.44
RBFOX1-215ENST00000553186 LRRN3E7EW58 273 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 HCN1O60741 890 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 NUDT14O95848 222 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 CDK1P06493 297 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 OR5M10Q6IEU7 315 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MARCH9Q86YJ5 346 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 CACTIN-AS1Q8N1I8 211 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 FAR1Q8WVX9 515 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 PRRG3Q9BZD7 231 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 CNOT2Q9NZN8 540 aaKnown RBP17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 GPR52Q9Y2T5 361 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 RIF1Q5UIP0 2472 aaKnown RBP17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 CDC40O60508 579 aaKnown RBP eCLIP17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 BMP7P18075 431 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 DLSTP36957 453 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MAP2K4P45985 399 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 LIMK1P53667 647 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MLLT10P55197 1068 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 Q0VFX4 171 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 QPRTQ15274 297 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MEDAGQ5VYS4 303 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 LNX2Q8N448 690 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 LRRC17Q8N6Y2 441 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 OR52L1Q8NGH7 329 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 OR13F1Q8NGS4 319 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MYDGFQ969H8 173 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 MUL1Q969V5 352 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 LHPPQ9H008 270 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 FBXL4Q9UKA2 621 aa17.8■□□□□ 0.44
RBFOX1-215ENST00000553186 HTR3EA5X5Y0 456 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 RAD1O60671 282 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 SEC14L2O76054 403 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 STSP08842 583 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 ST3GAL4Q11206 333 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 IL10RAQ13651 578 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 FCRLBQ6BAA4 426 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 ZNF582Q96NG8 517 aaPredicted RBP17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 TEX12Q9BXU0 123 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 MED17Q9NVC6 651 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 YARS2Q9Y2Z4 477 aaKnown RBP17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 HRH3Q9Y5N1 445 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 CHCHD2Q9Y6H1 151 aaPredicted RBP17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 CUL9Q8IWT3 2517 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 EFCAB10A6NFE3 127 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 HPP00738 406 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 HMGN1P05114 100 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 ADRA2AP08913 450 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 ST13P50502 369 aaKnown RBP17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 RTL4Q6ZR62 310 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 ACOT13Q9NPJ3 140 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 P4HTMQ9NXG6 502 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 KLRF1Q9NZS2 232 aa17.79■□□□□ 0.44
RBFOX1-215ENST00000553186 PCSK5Q92824 1860 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 LOC101059948A0A1B0GTJ6 334 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 STMND1H3BQB6 276 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 OR7A10O76100 309 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 INMTO95050 263 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 SLC2A10O95528 541 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 FADS2O95864 444 aaKnown RBP17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 PIPP12273 146 aaPredicted RBP17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 GP1BBP13224 206 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 ICAM2P13598 275 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 TTKP33981 857 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 CASP3P42574 277 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 ZNF91Q05481 1191 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 TMPRSS12Q86WS5 348 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 RPS19BP1Q86WX3 136 aaKnown RBP17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 LIPHQ8WWY8 451 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 CDCP1Q9H5V8 836 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 TAS2R10Q9NYW0 307 aa17.78■□□□□ 0.44
RBFOX1-215ENST00000553186 IGLV3-32A0A0A0MS00 114 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 ANKUB1A6NFN9 424 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 DBTP11182 482 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 CSRP1P21291 193 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 ACVR2AP27037 513 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 SLC9A3P48764 834 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 SUMO3P55854 103 aaPredicted RBP17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 MLF1P58340 268 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 RPS4XP62701 263 aaKnown RBP17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 ZNF74Q16587 644 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 CNPY1Q3B7I2 92 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 SVOPQ8N4V2 548 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 FAM117AQ9C073 453 aa17.77■□□□□ 0.44
RBFOX1-215ENST00000553186 METTL7AQ9H8H3 244 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms