RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 CPNE5Q9HCH3 593 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 GALNT9Q9HCQ5 603 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 MED17Q9NVC6 651 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 PPP4R1LQ9P1A2 415 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 ERVK-18Q9QC07 812 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 WIF1Q9Y5W5 379 aa11.56□□□□□ -0.56
CACNB3-223ENST00000552480 CHCHD2Q9Y6H1 151 aaPredicted RBP11.56□□□□□ -0.56
CACNB3-223ENST00000552480 PCSK5Q92824 1860 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 EFCAB10A6NFE3 127 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 CLCA1A8K7I4 914 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 BHLHE40O14503 412 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 GMFGO60234 142 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 MAN1A2O60476 641 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 ENTPD6O75354 484 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 MT-ND2P03891 347 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 BMP7P18075 431 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 CXCR1P25024 350 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 CASP3P42574 277 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 NOVA1P51513 510 aaKnown RBP11.55□□□□□ -0.56
CACNB3-223ENST00000552480 NUDT6P53370 316 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 DLX5P56178 289 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 PIGFQ07326 219 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 SNTA1Q13424 505 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 FOXB2Q5VYV0 432 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 BICRALQ6AI39 1079 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 H3F3CQ6NXT2 135 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 SLC30A6Q6NXT4 461 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 AHSA2Q719I0 299 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 SLC46A3Q7Z3Q1 461 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 GRINAQ7Z429 371 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 LSRQ86X29 649 aaPredicted RBP11.55□□□□□ -0.56
CACNB3-223ENST00000552480 MARCH9Q86YJ5 346 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 SVOPQ8N4V2 548 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 ADAMTS17Q8TE56 1095 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 LIPHQ8WWY8 451 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 ADAMTS14Q8WXS8 1223 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 ST8SIA1Q92185 356 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 GGHQ92820 318 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 FGF11Q92914 225 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 NKD1Q969G9 470 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 IP6K3Q96PC2 410 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 SIGLEC11Q96RL6 698 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 RHNO1Q9BSD3 238 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 COPS4Q9BT78 406 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 CCDC90BQ9GZT6 254 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 CNOT2Q9NZN8 540 aaKnown RBP11.55□□□□□ -0.56
CACNB3-223ENST00000552480 DNAJC27Q9NZQ0 273 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 OSGIN1Q9UJX0 560 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 BAIAP2Q9UQB8 552 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 ZNF337Q9Y3M9 751 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 PCDHGB1Q9Y5G3 927 aa11.55□□□□□ -0.56
CACNB3-223ENST00000552480 OTOGLQ3ZCN5 2332 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TRAV27A0A087WT01 109 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 C2orf72A6NCS6 295 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 MASP2O00187 686 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 SURF4O15260 269 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TLX2O43763 284 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-223ENST00000552480 CH25HO95992 272 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 CDK1P06493 297 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 PIPP12273 146 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-223ENST00000552480 PCMT1P22061 227 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 SLC6A6P31641 620 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 SLC15A1P46059 708 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 EGR4Q05215 589 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 FHL1Q13642 323 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 ATP1A4Q13733 1029 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 NEDD8Q15843 81 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TMEM44Q2T9K0 475 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 FCRLBQ6BAA4 426 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 XAF1Q6GPH4 301 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 JMJD6Q6NYC1 403 aaPredicted RBP11.54□□□□□ -0.56
CACNB3-223ENST00000552480 BORAQ6PGQ7 559 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 IL20RBQ6UXL0 311 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 LNX2Q8N448 690 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 OR51A7Q8NH64 312 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 PLEKHA8Q96JA3 519 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TNFRSF13CQ96RJ3 184 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TUBA1CQ9BQE3 449 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 IFT27Q9BW83 186 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 SH2D2AQ9NP31 389 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 MED11Q9P086 117 aa11.54□□□□□ -0.56
CACNB3-223ENST00000552480 RPL36Q9Y3U8 105 aaKnown RBP11.54□□□□□ -0.56
CACNB3-223ENST00000552480 MRPS18BQ9Y676 258 aaKnown RBP11.54□□□□□ -0.56
CACNB3-223ENST00000552480 TRAV36DV7A0A075B6V5 113 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 TMED7-TICAM2A0A0A6YYA0 188 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 TMEM72A0PK05 275 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 KDM4EB2RXH2 506 aaPredicted RBP11.53□□□□□ -0.56
CACNB3-223ENST00000552480 B4DXG7 233 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 ETV2O00321 342 aaPredicted RBP11.53□□□□□ -0.56
CACNB3-223ENST00000552480 SUSD5O60279 629 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 SLC25A12O75746 678 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 NDUFB2O95178 105 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 PRKCAP17252 672 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 TTKP33981 857 aa11.53□□□□□ -0.56
CACNB3-223ENST00000552480 RPS4XP62701 263 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms