RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 OR7D2Q96RA2 312 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 SDF2Q99470 211 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 PRPF18Q99633 342 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 TUBB1Q9H4B7 451 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 EML4Q9HC35 981 aaKnown RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 MYOZ1Q9NP98 299 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 PARPBPQ9NWS1 579 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 UPB1Q9UBR1 384 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 CHRNA9Q9UGM1 479 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 DCTN4Q9UJW0 460 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 HDGFL3Q9Y3E1 203 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 DNAJC15Q9Y5T4 150 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 ARFGEF3Q5TH69 2177 aa12.44□□□□□ -0.42
CHMP1A-210ENST00000551981 A0A1W2PPM1 405 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 LOC390937A0A1W2PQ73 354 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC35F4A4IF30 521 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 DUXAA6NLW8 204 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 CFLARO15519 480 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 KIAA0513O60268 411 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 STX11O75558 287 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 C6orf47O95873 294 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 ITGA5P08648 1049 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 UBTFL6P0CB48 400 aaPredicted RBP12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 CRHR1P34998 444 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC16A1P53985 500 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF141Q15928 474 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 CARTPTQ16568 116 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 IQCCQ4KMZ1 466 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 KLHL24Q6TFL4 600 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 CASP12Q6UXS9 341 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 OR5D16Q8NGK9 328 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF563Q8TA94 476 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 FBXO17Q96EF6 278 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 PPP3R2Q96LZ3 170 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 PRR14Q9BWN1 585 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC17A5Q9NRA2 495 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 MID2Q9UJV3 735 aa12.43□□□□□ -0.42
CHMP1A-210ENST00000551981 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 COPEO14579 308 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 LYPLA1O75608 230 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 WNT11O96014 354 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 TGFAP01135 160 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 SOAT1P35610 550 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 CLK1P49759 484 aaKnown RBP12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 SWI5Q1ZZU3 235 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 WDR31Q8NA23 367 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 OR52E4Q8NGH9 312 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 OR5AK3PQ8NH89 298 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 TWIST2Q8WVJ9 160 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 CTPS2Q9NRF8 586 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC35A3Q9Y2D2 325 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC9A8Q9Y2E8 581 aa12.42□□□□□ -0.42
CHMP1A-210ENST00000551981 PDLIM1O00151 329 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 PIP5K1BO14986 540 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 TCF21O43680 179 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 UGT2B17O75795 530 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF23P17027 643 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 MATN1P21941 496 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 OR2B6P58173 313 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 PRPS1P60891 318 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 RPS26P62854 115 aaKnown RBP12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 PTGR1Q14914 329 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 ATP6AP1LQ52LC2 224 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 C9orf135Q5VTT2 229 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 C16orf62Q7Z3J2 963 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC46A3Q7Z3Q1 461 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 GRINAQ7Z429 371 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 C10orf107Q8IVU9 208 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 CCDC103Q8IW40 242 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 RFLNBQ8N5W9 214 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 OIT3Q8WWZ8 545 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 COQ8BQ96D53 544 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 SORCS2Q96PQ0 1159 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 VRK1Q99986 396 aaPredicted RBP12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 KCNS3Q9BQ31 491 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 CCDC106Q9BWC9 280 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 BHLHE41Q9C0J9 482 aaPredicted RBP12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 EXD2Q9NVH0 621 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 TMEM181Q9P2C4 612 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 KCNE5Q9UJ90 142 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 MKLN1Q9UL63 735 aa12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
CHMP1A-210ENST00000551981 IGHV4-61A0A0C4DH41 118 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 FCMRO60667 390 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 EIF1BO60739 113 aaKnown RBP12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 TRIM13O60858 407 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 PEX11AO75192 247 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 FGF4P08620 206 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 PRPS1L1P21108 318 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 NTF4P34130 210 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 RYKP34925 604 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 HTR3AP46098 478 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 FOXG1P55316 489 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC35A1P78382 337 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC25A3Q00325 362 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 MST1LQ2TV78 715 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 CR1LQ2VPA4 569 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 ARHGAP11BQ3KRB8 267 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 FAM153CQ494X1 144 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms