RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 ZNF440Q8IYI8 595 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 STON2Q8WXE9 905 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 ZC3HAV1LQ96H79 300 aaKnown RBP11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 TMEM19Q96HH6 336 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 FOXC2Q99958 501 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 PSD2Q9BQI7 771 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 HDHD5Q9BXW7 423 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 ADAM19Q9H013 955 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 OR10A4Q9H209 315 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 CXXC4Q9H2H0 198 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 SLC25A37Q9NYZ2 338 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 KLHL9Q9P2J3 617 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 OSGIN1Q9UJX0 560 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 TRAPPC4Q9Y296 219 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 GPR52Q9Y2T5 361 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 HDGFL3Q9Y3E1 203 aa11.96□□□□□ -0.49
CR383656.13-201ENST00000550928 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 HRNRQ86YZ3 2850 aaPredicted RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 TMED7-TICAM2A0A0A6YYA0 188 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 CDHR4A6H8M9 788 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF724A8MTY0 619 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 NR5A2O00482 541 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF208O43345 1280 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 EDF1O60869 148 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 GCM2O75603 506 aaPredicted RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PMS2P2O95744 297 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 THBDP07204 575 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 NUDT7P0C024 238 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 GKN3PP0CG01 181 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 NCF2P19878 526 aaPredicted RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 KLK2P20151 261 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 CCNA2P20248 432 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PSMB1P20618 241 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 TACR3P29371 465 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ACAA2P42765 397 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 POLR2HP52434 150 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 MAP2K6P52564 334 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 FADDQ13158 208 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 LIN52Q52LA3 116 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PRAMEF8Q5VWM4 474 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PRAMEF7Q5VXH5 474 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 TFAP2EQ6VUC0 442 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF836Q6ZNA1 936 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 CLIP4Q8N3C7 705 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF775Q96BV0 537 aaPredicted RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 MBD6Q96DN6 1003 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PIK3IP1Q96FE7 263 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 ARL5BQ96KC2 179 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 SPATA9Q9BWV2 254 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 OR11A1Q9GZK7 315 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 RABEP2Q9H5N1 569 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 BCL2L10Q9HD36 194 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 A4GALTQ9NPC4 353 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 IFT52Q9Y366 437 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 TMED7Q9Y3B3 224 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 BOLA1Q9Y3E2 137 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 GMEB1Q9Y692 573 aa11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 PRRC2AP48634 2157 aaKnown RBP11.95□□□□□ -0.5
CR383656.13-201ENST00000550928 A0A1W2PP18 115 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 TMEM72A0PK05 275 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF814B7Z6K7 855 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 KLF4O43474 513 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 ATE1O95260 518 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 RAF1P04049 648 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 FESP07332 822 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 THBS1P07996 1170 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 UQCRBP14927 111 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 PPIBP23284 216 aaKnown RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 LOXP28300 417 aaPredicted RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 OR3A2P47893 321 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 KEAP1Q14145 624 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 SQLEQ14534 574 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 LARS2Q15031 903 aaKnown RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 PDK3Q15120 406 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 RPS26P11Q5JNZ5 115 aaPredicted RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 SFRP5Q5T4F7 317 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 RNF220Q5VTB9 566 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 PAMR1Q6UXH9 720 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 CXorf67Q86X51 503 aaPredicted RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 GABRG1Q8N1C3 465 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 STEAP2Q8NFT2 490 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 DDIT4LQ96D03 193 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF300Q96RE9 604 aaPredicted RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 ARMC7Q9H6L4 198 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 VAPAQ9P0L0 249 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 TMEM181Q9P2C4 612 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 ZNF443Q9Y2A4 671 aaPredicted RBP11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 CHST2Q9Y4C5 530 aa11.94□□□□□ -0.5
CR383656.13-201ENST00000550928 AKAP9Q99996 3911 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 IGKV3D-15A0A087WSY6 115 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 TRBV5-3A0A0A0MS03 114 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 DNPH1O43598 174 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 PGM3O95394 542 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 ADAP00813 363 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 GPX2P18283 190 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 CXCR1P25024 350 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 OR2B6P58173 313 aa11.93□□□□□ -0.5
CR383656.13-201ENST00000550928 H3F3AP84243 136 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms