RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 CHRNEQ04844 493 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 ABLIM2Q6H8Q1 611 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 OR4F3Q6IEY1 312 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 MUC15Q8N387 334 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 OR52N5Q8NH56 324 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 DPY30Q9C005 99 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 ASIC5Q9NY37 505 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 ATRQ13535 2644 aa20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 HEATR1Q9H583 2144 aaKnown RBP20.35■□□□□ 0.85
SMARCD1-209ENST00000550477 IGHV3-9P01782 118 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 UQCRC2P22695 453 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 RYKP34925 604 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 FABP6P51161 128 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 ZNF83P51522 516 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 C1QTNF12Q5T7M4 302 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 ARFGAP2Q8N6H7 521 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 MIPOL1Q8TD10 442 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 ZNF524Q96C55 264 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 NAA11Q9BSU3 229 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 ROPN1BQ9BZX4 212 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 FKRPQ9H9S5 495 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 ROPN1Q9HAT0 212 aaPredicted RBP20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 CTPS2Q9NRF8 586 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 NPAP1Q9NZP6 1156 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 UPB1Q9UBR1 384 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 DNHD1Q96M86 4753 aa20.34■□□□□ 0.85
SMARCD1-209ENST00000550477 FAM234BA2RU67 622 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 EIF1BO60739 113 aaKnown RBP20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 OR12D1P0DN82 309 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 CD40P25942 277 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 PGM1P36871 562 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 KCNJ10P78508 379 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 TGFBR3Q03167 851 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 CHRNB3Q05901 458 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 ZNF544Q6NX49 715 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 NUDCD3Q8IVD9 361 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 CLECL1Q8IZS7 167 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 OR8J2Q8NGG1 315 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 PMM1Q92871 262 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 CCDC106Q9BWC9 280 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 TMEM181Q9P2C4 612 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 KCNE5Q9UJ90 142 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 CDC42EP3Q9UKI2 254 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 TRAPPC4Q9Y296 219 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 PMF1-BGLAPU3KQ54 211 aa20.33■□□□□ 0.85
SMARCD1-209ENST00000550477 PRSS51A0A1B0GVH4 220 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 KIAA0513O60268 411 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 CPSF4O95639 269 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 BPGMP07738 259 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC25A16P16260 332 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 CHI3L1P36222 383 aaPredicted RBP20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 OR2B6P58173 313 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 KIRREL3Q8IZU9 778 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 ROPN1LQ96C74 230 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 DDIT4LQ96D03 193 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 MUS81Q96NY9 551 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 TNFRSF13CQ96RJ3 184 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 INPP5KQ9BT40 448 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 SERHL2Q9H4I8 314 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 EXOSC3Q9NQT5 275 aaKnown RBP20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 LGALS13Q9UHV8 139 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC25A15Q9Y619 301 aa20.32■□□□□ 0.84
SMARCD1-209ENST00000550477 E7EQL1 145 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 M0R1B8 84 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 CSF3P09919 207 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 UQCRBP14927 111 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 PTNP21246 168 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 EDNRAP25101 427 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 KHKP50053 298 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 ANXA11P50995 505 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 MAP2K6P52564 334 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC16A1P53985 500 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC35A1P78382 337 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 GNA13Q14344 377 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 GPAT3Q53EU6 434 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 TYW3Q6IPR3 259 aaKnown RBP20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 CLEC4FQ8N1N0 589 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 OR10H5Q8NGA6 315 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 SAP130Q9H0E3 1048 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 MALT1Q9UDY8 824 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 SLC9A8Q9Y2E8 581 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 PLCE1Q9P212 2302 aa20.31■□□□□ 0.84
SMARCD1-209ENST00000550477 IGHV4-30-2A0A087WSY4 118 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 ZNF716A6NP11 495 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 SNUPNO95149 360 aaKnown RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 MYZAPP0CAP1 466 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 IDH2P48735 452 aaKnown RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 CLNS1AP54105 237 aaKnown RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 CASP9P55211 416 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 IRX1P78414 480 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 LOXL1Q08397 574 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 DPY19L1Q2PZI1 675 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 TNFAIP8L2Q6P589 184 aaPredicted RBP20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 CMIPQ8IY22 773 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 C17orf78Q8N4C9 275 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 FAM71CQ8NEG0 241 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 FAM168AQ92567 244 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 KCNK17Q96T54 332 aa20.3■□□□□ 0.84
SMARCD1-209ENST00000550477 DCTN4Q9UJW0 460 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms