RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 ZNF440Q8IYI8 595 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 SLC38A5Q8WUX1 472 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 ZHX1-C8orf76Q96EF9 292 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 TMEM19Q96HH6 336 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 WFIKKN1Q96NZ8 548 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 TACO1Q9BSH4 297 aaKnown RBP8.48□□□□□ -1.05
USP15-208ENST00000548524 CCDC106Q9BWC9 280 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 ARMC7Q9H6L4 198 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 NPHS2Q9NP85 383 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 TMEM45AQ9NWC5 275 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 ZNF226Q9NYT6 803 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 KLHL9Q9P2J3 617 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 KLHL13Q9P2N7 655 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.48□□□□□ -1.05
USP15-208ENST00000548524 CHRNA9Q9UGM1 479 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 ZNF443Q9Y2A4 671 aaPredicted RBP8.48□□□□□ -1.05
USP15-208ENST00000548524 KIAA1549Q9HCM3 1950 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 AKAP9Q99996 3911 aa8.48□□□□□ -1.05
USP15-208ENST00000548524 NAV2Q8IVL1 2488 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 TMED7-TICAM2A0A0A6YYA0 188 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 A0A0G2JND7 137 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 A0A0G2JPF8 293 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 HNRNPCL2B2RXH8 293 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 HNRNPCL3B7ZW38 293 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 SULT2B1O00204 365 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 AP3D1O14617 1153 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 HNRNPCL1O60812 293 aaKnown RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 FESP07332 822 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 YES1P07947 543 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 HNRNPCL4P0DMR1 293 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 DNASE1P24855 282 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 FKBP2P26885 142 aaKnown RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 DIO1P49895 249 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 POLR2HP52434 150 aaKnown RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 OR2B6P58173 313 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 COPZ1P61923 177 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 PLAURQ03405 335 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 RASGEF1BQ0VAM2 473 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 EPS8Q12929 822 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 FADDQ13158 208 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 RGNQ15493 299 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 MAPK11Q15759 364 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 ZSWIM7Q19AV6 140 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 PAGE3Q5JUK9 113 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 LRIF1Q5T3J3 769 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 GCNT6Q5T4J0 391 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 ZNF836Q6ZNA1 936 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 NUFIP2Q7Z417 695 aaKnown RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 BBS10Q8TAM1 723 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 STON2Q8WXE9 905 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 DDIT4LQ96D03 193 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 DNAJA3Q96EY1 480 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 ZC3HAV1LQ96H79 300 aaKnown RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 SIKE1Q9BRV8 207 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 GP6Q9HCN6 339 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 A4GALTQ9NPC4 353 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 RLIMQ9NVW2 624 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 C6orf203Q9P0P8 240 aaPredicted RBP8.47□□□□□ -1.05
USP15-208ENST00000548524 ST6GALNAC2Q9UJ37 374 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 IFT52Q9Y366 437 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 TMED7Q9Y3B3 224 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 HDGFL3Q9Y3E1 203 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 CACNA1CQ13936 2221 aa8.47□□□□□ -1.05
USP15-208ENST00000548524 MED12Q93074 2177 aa8.46□□□□□ -1.05
USP15-208ENST00000548524 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
USP15-208ENST00000548524 A0A1W2PP18 115 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 TMEM72A0PK05 275 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 CDHR4A6H8M9 788 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 EVPLLA8MZ36 301 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 FAAHO00519 579 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 SMAD9O15198 467 aaKnown RBP8.46□□□□□ -1.06
USP15-208ENST00000548524 CYTIPO60759 359 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 ADAM11O75078 769 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 HRGP04196 525 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 FREM3P0C091 2139 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 GKN3PP0CG01 181 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 TROVE2P10155 538 aaKnown RBP eCLIP8.46□□□□□ -1.06
USP15-208ENST00000548524 PPP3CBP16298 524 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 CXCR1P25024 350 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 TACR3P29371 465 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 CCKARP32238 428 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 SLC1A3P43003 542 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 CLK1P49759 484 aaKnown RBP8.46□□□□□ -1.06
USP15-208ENST00000548524 ART1P52961 327 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 HSP90B2PQ58FF3 399 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 ZNF311Q5JNZ3 666 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 PRAMEF8Q5VWM4 474 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 PRAMEF7Q5VXH5 474 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 STAC2Q6ZMT1 411 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 MTDHQ86UE4 582 aaKnown RBP8.46□□□□□ -1.06
USP15-208ENST00000548524 ADGRG3Q86Y34 549 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 CADM2Q8N3J6 435 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 NFKBIDQ8NI38 313 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 NINJ1Q92982 152 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 MAL2Q969L2 176 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 PIK3IP1Q96FE7 263 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 PSD2Q9BQI7 771 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 SPATA9Q9BWV2 254 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 OR11A1Q9GZK7 315 aa8.46□□□□□ -1.06
USP15-208ENST00000548524 LIME1Q9H400 295 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms