RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GIPC3Q8TF64 312 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 EME1Q96AY2 570 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 DDIT4LQ96D03 193 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 RDH12Q96NR8 316 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 RBM4BQ9BQ04 359 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 RBM4Q9BWF3 364 aaKnown RBP14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 HES7Q9BYE0 225 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 MGAT4BQ9UQ53 548 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 VDAC3Q9Y277 283 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 TMED7Q9Y3B3 224 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 AP4B1Q9Y6B7 739 aa14.5□□□□□ -0.09
PRPF40A-212ENST00000545856 A0A087WUU8 490 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 PINLYPA6NC86 204 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 G3V3Y1 287 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 H0YJX3 145 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 ZIC3O60481 467 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 ACTL6AO96019 429 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 IGHG3P01860 377 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 PDGFAP04085 211 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 THY1P04216 161 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 GSTM3P21266 225 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 CD97P48960 835 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 PPIAP62937 165 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 RAC1P63000 192 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 COX10Q12887 443 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 SLC10A1Q14973 349 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 TAF11Q15544 211 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 TRIP10Q15642 601 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 INPP5JQ15735 1006 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 TOMM34Q15785 309 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 BCL2A1Q16548 175 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 EXOC3L2Q2M3D2 409 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 OGFRL1Q5TC84 451 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 SLC6A19Q695T7 634 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 CD300LDQ6UXZ3 194 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF730Q6ZMV8 503 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 LSM14AQ8ND56 463 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 FAM83FQ8NEG4 500 aaPredicted RBP14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 OR4K5Q8NGD3 323 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 OR14L1PQ8NHC6 308 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 DGCR6LQ9BY27 220 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 SLC25A18Q9H1K4 315 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 USE1Q9NZ43 259 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 OAZ3Q9UMX2 235 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 HDGFL3Q9Y3E1 203 aa14.49□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF407Q9C0G0 2248 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 OR2M5A3KFT3 312 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 TFECO14948 347 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 SUSD5O60279 629 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 NPIPB7O75200 414 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 MT-ATP6P00846 226 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 SLC9A3P48764 834 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 PRKCDQ05655 676 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 KLRB1Q12918 225 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 SNCBQ16143 134 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 RAET1LQ5VY80 246 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF770Q6IQ21 691 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 C1orf94Q6P1W5 598 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 PODNL1Q6PEZ8 512 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 TMPRSS11FQ6ZWK6 438 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 AMIGO2Q86SJ2 522 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 ADGRG3Q86Y34 549 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 OR10G2Q8NGC3 310 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 LIPHQ8WWY8 451 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 CTPS2Q9NRF8 586 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 PAQR5Q9NXK6 330 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 RHCGQ9UBD6 479 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 LHX6Q9UPM6 363 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 CSAG2Q9Y5P2 127 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 ATMQ13315 3056 aa14.48□□□□□ -0.09
PRPF40A-212ENST00000545856 TRAV36DV7A0A075B6V5 113 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 TRBV4-1A0A0J9YWV2 114 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 C17orf51A8MQB3 221 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 OR10H3O60404 316 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 RFPL3SP0C7P2 107 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 FAM87AP0C7U9 286 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 CDH2P19022 906 aaPredicted RBP14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 FPR3P25089 353 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ST13P50502 369 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ALDH3A2P51648 485 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 UGT2B15P54855 530 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 GFRA1P56159 465 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PPP2R2BQ00005 443 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 SYT14P1Q58G82 188 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PPP4R4Q6NUP7 873 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 RPL13AP3Q6NVV1 102 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 FAHD1Q6P587 224 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ZBTB49Q6ZSB9 765 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 NKAIN4Q8IVV8 208 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PARP8Q8N3A8 854 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ICA1LQ8NDH6 482 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 OR52J3Q8NH60 311 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 POC1BQ8TC44 478 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 SFXN2Q96NB2 322 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PRR14Q9BWN1 585 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 NDEL1Q9GZM8 345 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 SEMA6AQ9H2E6 1030 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 ZNF556Q9HAH1 456 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 PLSCR2Q9NRY7 297 aa14.47□□□□□ -0.09
PRPF40A-212ENST00000545856 VNN3Q9NY84 501 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms