RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 MPP4Q96JB8 637 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 PRRC1Q96M27 445 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 ZNF300Q96RE9 604 aaPredicted RBP5.98□□□□□ -1.45
CDCA3-209ENST00000544610 PIP5K1AQ99755 562 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 KRTAP9-9Q9BYP9 154 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 CLEC4MQ9H2X3 399 aaPredicted RBP5.98□□□□□ -1.45
CDCA3-209ENST00000544610 TP63Q9H3D4 680 aaPredicted RBP5.98□□□□□ -1.45
CDCA3-209ENST00000544610 SDHAF3Q9NRP4 125 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 USE1Q9NZ43 259 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 CNIH4Q9P003 139 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 KCNN3Q9UGI6 736 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 ZNF223Q9UK11 482 aaPredicted RBP5.98□□□□□ -1.45
CDCA3-209ENST00000544610 USP22Q9UPT9 525 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 AURKCQ9UQB9 309 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 RNF6Q9Y252 685 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 ZNF443Q9Y2A4 671 aaPredicted RBP5.98□□□□□ -1.45
CDCA3-209ENST00000544610 DTX4Q9Y2E6 619 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 KCNE3Q9Y6H6 103 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 CNTRLQ7Z7A1 2325 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 POLQO75417 2590 aa5.98□□□□□ -1.45
CDCA3-209ENST00000544610 SVILO95425 2214 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 TRBV11-1A0A0K0K1C0 115 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 NKX2-6A6NCS4 301 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SERINC4A6NH21 518 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 FAM90A27PA6NNH2 459 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 J3QW42 95 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 TP53I11O14683 189 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 CDC40O60508 579 aaKnown RBP eCLIP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 TOXO94900 526 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SNX4O95219 450 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 UTS2O95399 124 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 NADKO95544 446 aaPredicted RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 C1QCP02747 245 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 HOXD4P09016 255 aaPredicted RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 HPGDP15428 266 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 FPR1P21462 350 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 AQP1P29972 269 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 IFNGR2P38484 337 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 VHLP40337 213 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RFC3P40938 356 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RBM34P42696 430 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 LIMS1P48059 325 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 PTDSS1P48651 473 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 NR0B1P51843 470 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 ART1P52961 327 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 VLDLRP98155 873 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 C17orf67Q0P5P2 114 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 PLCXD2Q0VAA5 305 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 ST3GAL3Q11203 375 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 COX10Q12887 443 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 C21orf62-AS1Q17RA5 79 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 ZNF791Q3KP31 576 aaPredicted RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 EMC4Q5J8M3 183 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SHQ1Q6PI26 577 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 MYO7BQ6PIF6 2116 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 C5orf46Q6UWT4 87 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 CD300LDQ6UXZ3 194 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 MDGA2Q7Z553 956 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 CARM1Q86X55 608 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 LILRA2Q8N149 483 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 CYP4Z2PQ8N1L4 340 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SLC43A2Q8N370 569 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RPRMLQ8N4K4 120 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SIMC1Q8NDZ2 872 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 OR5K1Q8NHB7 308 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 DNAJA4Q8WW22 397 aaPredicted RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 PIK3R3Q92569 461 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RND1Q92730 232 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SPACA9Q96E40 222 aaPredicted RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 OMA1Q96E52 524 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 TPD52L3Q96J77 140 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 HS6ST2Q96MM7 605 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SEPHS2Q99611 448 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RBM4BQ9BQ04 359 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 ZNF559Q9BR84 538 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 YIPF4Q9BSR8 244 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 RBM4Q9BWF3 364 aaKnown RBP5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SLC19A3Q9BZV2 496 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 UCK2Q9BZX2 261 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 TRIM2Q9C040 744 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 LAT2Q9GZY6 243 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 GABARAPL1Q9H0R8 117 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 REEP1Q9H902 201 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 ANKRA2Q9H9E1 313 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 SH2D2AQ9NP31 389 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 MKLN1Q9UL63 735 aa5.97□□□□□ -1.45
CDCA3-209ENST00000544610 GXYLT2A0PJZ3 443 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 TRAPPC13A5PLN9 417 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 A8MUA0 341 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 AP3D1O14617 1153 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ZNF264O43296 627 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 FADS1O60427 444 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ITGA10O75578 1167 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 REM1O75628 298 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 SMNDC1O75940 238 aaKnown RBP eCLIP5.96□□□□□ -1.46
CDCA3-209ENST00000544610 CSTAP01040 98 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 IGKV1D-16P01601 117 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 PNMTP11086 282 aa5.96□□□□□ -1.46
CDCA3-209ENST00000544610 ANXA8P13928 327 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms