RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 DDX19BQ9UMR2 479 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 EIF3LQ9Y262 564 aaKnown RBP2.93□□□□□ -1.94
SCFD1-207ENST00000544052 NLRC5Q86WI3 1866 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 KIAA1671Q9BY89 1806 aa2.93□□□□□ -1.94
SCFD1-207ENST00000544052 TRAV9-2A0A087WT02 112 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 GALR3O60755 368 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 FLOT1O75955 427 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SNAI1O95863 264 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 NDUFB10O96000 172 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 UMPSP11172 480 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CAPN2P17655 700 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PLA2G16P53816 162 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 RPL8P62917 257 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 NTHL1P78549 312 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SLC10A1Q14973 349 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SHHQ15465 462 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SBK1Q52WX2 424 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 C10orf120Q5SQS8 335 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 FAM120AOSQ5T036 256 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF57Q68EA5 555 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 RALGAPA1Q6GYQ0 2036 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CENPPQ6IPU0 288 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PMF1Q6P1K2 205 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SCYL2Q6P3W7 929 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 STAC2Q6ZMT1 411 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 MICAL3Q7RTP6 2002 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ANKRD37Q7Z713 158 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 BPIFB2Q8N4F0 458 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CSNK1G2-AS1Q8NCQ2 148 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SPRYD4Q8WW59 207 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SHC3Q92529 594 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 POLD4Q9HCU8 107 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 BRWD1Q9NSI6 2320 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 GNG12Q9UBI6 72 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 LCMT1Q9UIC8 334 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CLEC4AQ9UMR7 237 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SYNRGQ9UMZ2 1314 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 GPAA1O43292 621 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 NMT2O60551 498 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SNNO75324 88 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PGK1P00558 417 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 F10P00742 488 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 IGHV3-13P01766 116 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PCMT1P22061 227 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PSMA2P25787 234 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PTBP1P26599 531 aaKnown RBP eCLIP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ACVR1BP36896 505 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 OR1D4P47884 311 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ARHGDIBP52566 201 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 LIM2P55344 173 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 HMGN5P82970 282 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SYPL1Q16563 259 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 LGSNQ5TDP6 509 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ACSM5Q6NUN0 579 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CCBE1Q6UXH8 406 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 TMUB2Q71RG4 321 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 CEACAM19Q7Z692 300 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SLC25A42Q86VD7 318 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 TMEM17Q86X19 198 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 DEFB123Q8N688 67 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 C17orf47Q8NEP4 570 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 OR2T33Q8NG76 320 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 BADQ92934 168 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SDSLQ96GA7 329 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 MCCC1Q96RQ3 725 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 RIT2Q99578 217 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 GON7Q9BXV9 100 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 VCX2Q9H322 139 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 IKZF5Q9H5V7 419 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 AMBNQ9NP70 447 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 TIGARQ9NQ88 270 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 FAM120CQ9NX05 1096 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 ELOVL2Q9NXB9 296 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 MRPL39Q9NYK5 338 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 RNF14Q9UBS8 474 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SLC2A6Q9UGQ3 507 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PTBP2Q9UKA9 531 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 NTNG1Q9Y2I2 539 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 MRPS7Q9Y2R9 242 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 SPACA6W5XKT8 324 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 XIRP2A4UGR9 3374 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 PRRC2BQ5JSZ5 2229 aaKnown RBP2.92□□□□□ -1.94
SCFD1-207ENST00000544052 TTC28Q96AY4 2481 aa2.92□□□□□ -1.94
SCFD1-207ENST00000544052 IGKV3D-15A0A087WSY6 115 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 C15orf38-AP3S2A0A0A6YYH1 394 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 MBLAC1A4D2B0 266 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 F5H6K3 240 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF253O75346 499 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 CA1P00915 261 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 HOXD4P09016 255 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SNRPCP09234 159 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 IGFBP5P24593 272 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ATP5A1P25705 553 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ALDH3B2P48448 385 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 NOVP48745 357 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 PPT1P50897 306 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SNAP25P60880 206 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 KLRC3Q07444 240 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ST3GAL3Q11203 375 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 PPP1R3AQ16821 1122 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms