RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 LIPNQ5VXI9 398 aa15.57■□□□□ 0.08
CLSTN3-214ENST00000542663 OR5AK3PQ8NH89 298 aa15.57■□□□□ 0.08
CLSTN3-214ENST00000542663 PIGXQ8TBF5 258 aa15.57■□□□□ 0.08
CLSTN3-214ENST00000542663 TMEM234Q8WY98 164 aa15.57■□□□□ 0.08
CLSTN3-214ENST00000542663 CTPS2Q9NRF8 586 aa15.57■□□□□ 0.08
CLSTN3-214ENST00000542663 TMEM233B4DJY2 109 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 GPR171O14626 319 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 BCAS1O75363 584 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 URI1O94763 535 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 CSTAP01040 98 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 TGFAP01135 160 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 UBTFL6P0CB48 400 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 TFPIP10646 304 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 CPA3P15088 417 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 PGCP20142 388 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 RPS26P62854 115 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 PTGR1Q14914 329 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 CR1LQ2VPA4 569 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 UGT3A2Q3SY77 523 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 CCDC153Q494R4 210 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 SPDYE7PQ495Y7 208 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 TRMT10CQ7L0Y3 403 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 C17orf78Q8N4C9 275 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 FAM71CQ8NEG0 241 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 C1orf162Q8NEQ5 155 aaPredicted RBP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 TRMOQ9BU70 441 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 OR11A1Q9GZK7 315 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 SLC7A10Q9NS82 523 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 DCTN4Q9UJW0 460 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 MKLN1Q9UL63 735 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 MOKQ9UQ07 419 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 AMDHD2Q9Y303 409 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 FKBP7Q9Y680 259 aa15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLSTN3-214ENST00000542663 LOC390937A0A1W2PQ73 354 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 KIAA0513O60268 411 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 ZNF23P17027 643 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 PGM1P36871 562 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 APOBEC1P41238 236 aaKnown RBP15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 H3F3AP84243 136 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 RUNX1T1Q06455 604 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 MAPK14Q16539 360 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 WHAMMP3Q1A5X7 153 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 KRTCAP2Q8N6L1 136 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 ANKS4BQ8N8V4 417 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 TWIST2Q8WVJ9 160 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 MOAP1Q96BY2 351 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 COQ8BQ96D53 544 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 ZHX1-C8orf76Q96EF9 292 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 GATA5Q9BWX5 397 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 CHRNA9Q9UGM1 479 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 FLVCR1Q9Y5Y0 555 aa15.55■□□□□ 0.08
CLSTN3-214ENST00000542663 PIP5K1BO14986 540 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 DNPH1O43598 174 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 DDX5P17844 614 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 CRHR1P34998 444 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 RPL3P39023 403 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 HBA1P69905 142 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 PLAURQ03405 335 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 PCLAFQ15004 111 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 CARTPTQ16568 116 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 ARHGAP11BQ3KRB8 267 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 LSM12Q3MHD2 195 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 TSPO2Q5TGU0 170 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 CASP12Q6UXS9 341 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 MEX3DQ86XN8 651 aaKnown RBP15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 ADGRG3Q86Y34 549 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 C10orf107Q8IVU9 208 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 DDIASQ8IXT1 998 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 RFLNBQ8N5W9 214 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 BPESC1Q9GZL8 116 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 ZNF350Q9GZX5 532 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 HDGFL3Q9Y3E1 203 aa15.54■□□□□ 0.08
CLSTN3-214ENST00000542663 TMEM114B3SHH9 223 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 STX11O75558 287 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 CHEK2O96017 543 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 CHRNGP07510 517 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 FGF4P08620 206 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 ITGA2P17301 1181 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 MATN1P21941 496 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 MAGEA8P43361 318 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 XKR7Q5GH72 579 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 EIF3MQ7L2H7 374 aaKnown RBP15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 RIMKLAQ8IXN7 391 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 CLEC4FQ8N1N0 589 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 CCDC63Q8NA47 563 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 C1orf50Q9BV19 199 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 TXLNGYQ9BZA5 131 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 PLA2G12AQ9BZM1 189 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 MYOZ1Q9NP98 299 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 ATAD3AQ9NVI7 634 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 UPB1Q9UBR1 384 aa15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 SPIN1Q9Y657 262 aaPredicted RBP15.53■□□□□ 0.08
CLSTN3-214ENST00000542663 LRP5LA4QPB2 252 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 ANKRD28O15084 1053 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 TCF21O43680 179 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 PEX11AO75192 247 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 SLU7O95391 586 aaKnown RBP15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 FAM153BP0C7A2 387 aa15.52■□□□□ 0.08
CLSTN3-214ENST00000542663 IL2RGP31785 369 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms