RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SLC6A13Q9NSD5 602 aa17.52■□□□□ 0.4
DDX11-220ENST00000542244 EXD2Q9NVH0 621 aa17.52■□□□□ 0.4
DDX11-220ENST00000542244 CR1P17927 2039 aa17.52■□□□□ 0.39
DDX11-220ENST00000542244 IGKV3D-15A0A087WSY6 115 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 A0A1W2PP18 115 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 ZC3H12DA2A288 527 aaKnown RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 BIRC5O15392 142 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 MYZAPP0CAP1 466 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 IMPDH2P12268 514 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 IDH2P48735 452 aaKnown RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 KCNJ10P78508 379 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 GPAT3Q53EU6 434 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 TNFAIP8L3Q5GJ75 292 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 AP1ARQ63HQ0 302 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 B3GLCTQ6Y288 498 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 DNM1P46Q6ZS02 220 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 MREGQ8N565 214 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 OR52E4Q8NGH9 312 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 OR52N5Q8NH56 324 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 ZNF563Q8TA94 476 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 PNPT1Q8TCS8 783 aaKnown RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 TMEM234Q8WY98 164 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 ZIM3Q96PE6 472 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 C1QTNF6Q9BXI9 259 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 REG4Q9BYZ8 158 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 SLC38A1Q9H2H9 487 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 SERINC1Q9NRX5 453 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 CISD1Q9NZ45 108 aaKnown RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 MARCOQ9UEW3 520 aaPredicted RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 CHRNA9Q9UGM1 479 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 HAO1Q9UJM8 370 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 PCDHGB4Q9UN71 923 aa17.51■□□□□ 0.39
DDX11-220ENST00000542244 FBN1P35555 2871 aaKnown RBP17.51■□□□□ 0.39
DDX11-220ENST00000542244 TMEM72A0PK05 275 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 OR5H1A6NKK0 313 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 E7EQL1 145 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 SDHDO14521 159 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 ABCD4O14678 606 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 RGS16O15492 202 aaPredicted RBP17.5■□□□□ 0.39
DDX11-220ENST00000542244 LBPP18428 481 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 GGT1P19440 569 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 ZNF83P51522 516 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 BST1Q10588 318 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 ANXA8L1Q5VT79 327 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 C9orf135Q5VTT2 229 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 GTPBP3Q969Y2 492 aaKnown RBP17.5■□□□□ 0.39
DDX11-220ENST00000542244 CCDC115Q96NT0 180 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 PARD6BQ9BYG5 372 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 WDR55Q9H6Y2 383 aaPredicted RBP17.5■□□□□ 0.39
DDX11-220ENST00000542244 MEAF6Q9HAF1 191 aa17.5■□□□□ 0.39
DDX11-220ENST00000542244 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.5■□□□□ 0.39
DDX11-220ENST00000542244 GOLGA8QA0A0J9YX86 632 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 GOLGA8OA6NCC3 632 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 E9PBE3 544 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 GOLGA8NF8WBI6 632 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 TMCC2O75069 709 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 GUSBP08236 651 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 CHI3L1P36222 383 aaPredicted RBP17.49■□□□□ 0.39
DDX11-220ENST00000542244 APOBEC1P41238 236 aaKnown RBP17.49■□□□□ 0.39
DDX11-220ENST00000542244 KHKP50053 298 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 CDH11P55287 796 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 OR2B6P58173 313 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 PPP2R2BQ00005 443 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 SLC25A3Q00325 362 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 TIMM23BQ5SRD1 257 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 ATAD3BQ5T9A4 648 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 FBXW9Q5XUX1 488 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 DNAJC14Q6Y2X3 702 aaPredicted RBP17.49■□□□□ 0.39
DDX11-220ENST00000542244 GRINAQ7Z429 371 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 UBE2J2Q8N2K1 259 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 NGBQ9NPG2 151 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 POLE3Q9NRF9 147 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 AIG1Q9NVV5 245 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 OSGIN1Q9UJX0 560 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 B3GALT5Q9Y2C3 310 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 SLC35A3Q9Y2D2 325 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 NOSIPQ9Y314 301 aaKnown RBP17.49■□□□□ 0.39
DDX11-220ENST00000542244 SLC25A15Q9Y619 301 aa17.49■□□□□ 0.39
DDX11-220ENST00000542244 SONP18583 2426 aaKnown RBP17.49■□□□□ 0.39
DDX11-220ENST00000542244 TMED7-TICAM2A0A0A6YYA0 188 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 CCDC154A6NI56 674 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 PMS2P2O95744 297 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 ITGA5P08648 1049 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 S100A3P33764 101 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 CSNK2A1P68400 391 aaPredicted RBP17.48■□□□□ 0.39
DDX11-220ENST00000542244 IRX1P78414 480 aaPredicted RBP17.48■□□□□ 0.39
DDX11-220ENST00000542244 STX3Q13277 289 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 PDK3Q15120 406 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 DTX2Q86UW9 622 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 ARFGAP2Q8N6H7 521 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 WDR31Q8NA23 367 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 SLC25A43Q8WUT9 341 aaPredicted RBP17.48■□□□□ 0.39
DDX11-220ENST00000542244 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 SSU72Q9NP77 194 aaKnown RBP17.48■□□□□ 0.39
DDX11-220ENST00000542244 KCNK9Q9NPC2 374 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.48■□□□□ 0.39
DDX11-220ENST00000542244 RLIMQ9NVW2 624 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 BTNL2Q9UIR0 455 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 TMED7Q9Y3B3 224 aa17.48■□□□□ 0.39
DDX11-220ENST00000542244 GPRIN2O60269 458 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms