RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 KPNA4O00629 521 aaPredicted RBP25.26■■□□□ 1.63
CCM2-218ENST00000541586 RBM34P42696 430 aaKnown RBP25.26■■□□□ 1.63
CCM2-218ENST00000541586 CD97P48960 835 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 ZNF791Q3KP31 576 aaPredicted RBP25.26■■□□□ 1.63
CCM2-218ENST00000541586 IGFL2Q6UWQ7 119 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 ASB18Q6ZVZ8 466 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 ZADH2Q8N4Q0 377 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 EXD3Q8N9H8 876 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 C9orf43Q8TAL5 461 aaPredicted RBP25.26■■□□□ 1.63
CCM2-218ENST00000541586 DUSP19Q8WTR2 217 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 SIGLEC12Q96PQ1 595 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 MED31Q9Y3C7 131 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 BOD1L1Q8NFC6 3051 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 OR5H15A6NDH6 313 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 MST1P26927 711 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 NUP107P57740 925 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 PRKCDQ05655 676 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 OR1C1Q15619 314 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 LAIR2Q6ISS4 152 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 KIF18BQ86Y91 864 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 OR5W2Q8NH69 310 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 FAM81AQ8TBF8 368 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 UBE2FQ969M7 185 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 DSN1Q9H410 356 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 GALNT9Q9HCQ5 603 aa25.26■■□□□ 1.63
CCM2-218ENST00000541586 MEPEQ9NQ76 525 aaPredicted RBP25.26■■□□□ 1.63
CCM2-218ENST00000541586 IFI30P13284 250 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 P2RX1P51575 399 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 GAS1P54826 345 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 CDK5R2Q13319 367 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 BICRALQ6AI39 1079 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 RASSF6Q6ZTQ3 369 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 MDGA2Q7Z553 956 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 ZNF563Q8TA94 476 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 CNIH3Q8TBE1 160 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 MFRPQ9BY79 579 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 ADNPQ9H2P0 1102 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 PIEZO2Q9H5I5 2752 aa25.25■■□□□ 1.63
CCM2-218ENST00000541586 A0A087WUJ7 227 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 CDC42EP2O14613 210 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 GNB5O14775 395 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 C6orf141Q5SZD1 244 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 ENTHD1Q8IYW4 607 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 B4GALNT2Q8NHY0 566 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 YTHDF1Q9BYJ9 559 aaKnown RBP25.24■■□□□ 1.63
CCM2-218ENST00000541586 KLRF1Q9NZS2 232 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 AASSQ9UDR5 926 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 PCDHGB7Q9Y5F8 929 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 NBEAQ8NFP9 2946 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 CPAMD8Q8IZJ3 1885 aa25.24■■□□□ 1.63
CCM2-218ENST00000541586 C2orf72A6NCS6 295 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 ERVH48-1M5A8F1 160 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 SMNDC1O75940 238 aaKnown RBP eCLIP25.23■■□□□ 1.63
CCM2-218ENST00000541586 SMIM18P0DKX4 95 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 MAKP20794 623 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 SLC1A3P43003 542 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 CTBP2P56545 445 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 C17orf67Q0P5P2 114 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 CBFBQ13951 182 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 LY6DQ14210 128 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 MAD2L1BPQ15013 274 aaPredicted RBP25.23■■□□□ 1.63
CCM2-218ENST00000541586 TOMM34Q15785 309 aaPredicted RBP25.23■■□□□ 1.63
CCM2-218ENST00000541586 KCTD21Q4G0X4 260 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 ATG4DQ86TL0 474 aaPredicted RBP25.23■■□□□ 1.63
CCM2-218ENST00000541586 P3H2Q8IVL5 708 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 HDAC2Q92769 488 aaKnown RBP25.23■■□□□ 1.63
CCM2-218ENST00000541586 BPIFA2Q96DR5 249 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 EGLN3Q9H6Z9 239 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 RASSF1Q9NS23 344 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 RNF6Q9Y252 685 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 BSNQ9UPA5 3926 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 EPG5Q9HCE0 2579 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 NUDT14O95848 222 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 PGCP20142 388 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 CDK20Q8IZL9 346 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 PLA2G12AQ9BZM1 189 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 RNF32Q9H0A6 362 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 METTL7AQ9H8H3 244 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 KLHL1Q9NR64 748 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 TUBD1Q9UJT1 453 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 TMEM5Q9Y2B1 443 aa25.23■■□□□ 1.63
CCM2-218ENST00000541586 ITPR1Q14643 2758 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 NEURL1O76050 574 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 PTGDSP41222 190 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 SLX4IPQ5VYV7 408 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 OR5M10Q6IEU7 315 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 IGFL3Q6UXB1 125 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 TMPRSS11FQ6ZWK6 438 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 ZNF227Q86WZ6 799 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 DEPDC4Q8N2C3 294 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 ADAM19Q9H013 955 aa25.22■■□□□ 1.63
CCM2-218ENST00000541586 CHCHD2Q9Y6H1 151 aaPredicted RBP25.22■■□□□ 1.63
CCM2-218ENST00000541586 TP53I11O14683 189 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 SLC25A12O75746 678 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 PNMTP11086 282 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 TNFSF10P50591 281 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 CDC42P60953 191 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 RBM48Q5RL73 367 aaKnown RBP25.21■■□□□ 1.63
CCM2-218ENST00000541586 RTL4Q6ZR62 310 aa25.21■■□□□ 1.63
CCM2-218ENST00000541586 GPALPP1Q8IXQ4 340 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms