RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 LZICQ8WZA0 190 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 PEX13Q92968 403 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 EFHD2Q96C19 240 aaPredicted RBP3.87□□□□□ -1.79
YBX3-210ENST00000540975 HAVCR1Q96D42 359 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 C19orf60Q96EN9 201 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 TMEM80Q96HE8 168 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
YBX3-210ENST00000540975 ATP6V0BQ99437 205 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 EBF4Q9BQW3 602 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 NICN1Q9BSH3 213 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 THAP9Q9H5L6 903 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 HAUS4Q9H6D7 363 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 PTGES2Q9H7Z7 377 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 GDAP2Q9NXN4 497 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 SLC39A1Q9NY26 324 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 HMGXB4Q9UGU5 601 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 IL19Q9UHD0 177 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 NEU3Q9UQ49 428 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 ATP8B3O60423 1300 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 NESP48681 1621 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 SBNO1A3KN83 1393 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 USP47Q96K76 1375 aa3.87□□□□□ -1.79
YBX3-210ENST00000540975 RALGAPBQ86X10 1494 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 WDR62O43379 1518 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CLTCL1P53675 1640 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 HEATR9A2RTY3 570 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 NCF1BA6NI72 391 aaPredicted RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 LRRIQ3A6PVS8 624 aaPredicted RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 NCF1CA8MVU1 366 aaPredicted RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 GPR89AB7ZAQ6 455 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 H3BTX0 84 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 K7ENP7 123 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 ADAM12O43184 909 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 PEX11AO75192 247 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 IDH1O75874 414 aaKnown RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 ERLIN2O94905 339 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 KLHL2O95198 593 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 HLA-DRAP01903 254 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 KRT14P02533 472 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 IVLP07476 585 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 RETP07949 1114 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 STSP08842 583 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 GPR89BP0CG08 455 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 PRKACBP22694 351 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 PTPN6P29350 595 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 HOXA6P31267 233 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CCT6AP40227 531 aaKnown RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 PPP1R2P41236 205 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 DHPSP49366 369 aaPredicted RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 CARD18P57730 90 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 TPM4P67936 248 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 MRPS11P82912 194 aaKnown RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 OC90Q02509 493 aaPredicted RBP3.86□□□□□ -1.79
YBX3-210ENST00000540975 ZNF154Q13106 437 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CBX3Q13185 183 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CUL1Q13616 776 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 NCF4Q15080 339 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 FAM120AOSQ5T036 256 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 ATL3Q6DD88 541 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 ETFRF1Q6IPR1 90 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 PPP1R2P3Q6NXS1 205 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 Q7L0L9 218 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 TAF8Q7Z7C8 310 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 SLC5A11Q8WWX8 675 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 SLC25A36Q96CQ1 311 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CNPY3Q9BT09 278 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 PARD6BQ9BYG5 372 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 SYNDIG1Q9H7V2 258 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 POLE3Q9NRF9 147 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 ONECUT1Q9UBC0 465 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 CBY1Q9Y3M2 126 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 ASB3Q9Y575 518 aa3.86□□□□□ -1.79
YBX3-210ENST00000540975 C15orf38-AP3S2A0A0A6YYH1 394 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 LOC105371267A0A1B0GV96 52 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 A0A1B0GWJ7 208 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 SYCE3A1L190 88 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 SAGE2PA6NJ88 616 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 TRIM49D1C9J1S8 452 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NDUFS8O00217 210 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 NDUFA7O95182 113 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 MBD3O95983 291 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 IGKV3-11P04433 115 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 GLAP06280 429 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 CD55P08174 381 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 UBTFL6P0CB48 400 aaPredicted RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 ANXA8P13928 327 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 POLR2EP19388 210 aaKnown RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 CCNA2P20248 432 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 IL32P24001 234 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 RBMXP38159 391 aaKnown RBP3.85□□□□□ -1.79
YBX3-210ENST00000540975 HTR5AP47898 357 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 MAP3K7CLP57077 242 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 VBP1P61758 197 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 POLR2GP62487 172 aaKnown RBP eCLIP3.85□□□□□ -1.79
YBX3-210ENST00000540975 RIPK1Q13546 671 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 BCL2A1Q16548 175 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 MOGQ16653 247 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 HSP90AA4PQ58FG1 418 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 CFAP157Q5JU67 520 aa3.85□□□□□ -1.79
YBX3-210ENST00000540975 DCST2Q5T1A1 773 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms