RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 SPIBQ01892 262 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 RIPPLY2Q5TAB7 128 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 HBMQ6B0K9 141 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 KIAA0930Q6ICG6 404 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 PRSS55Q6UWB4 352 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 LDB1Q86U70 411 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 C1QL4Q86Z23 238 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SLC35F3Q8IY50 421 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 FAM98AQ8NCA5 519 aaKnown RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 OR56B1Q8NGI3 324 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 OR1J4Q8NGS1 313 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 NUBPLQ8TB37 319 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 PAQR8Q8TEZ7 354 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ING5Q8WYH8 240 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TMEM143Q96AN5 459 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 MRI1Q9BV20 369 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 FAIM2Q9BWQ8 316 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ZNF471Q9BX82 626 aaPredicted RBP8.78□□□□□ -1
CLIP1-214ENST00000540539 GPR62Q9BZJ7 368 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TM6SF2Q9BZW4 377 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 DPY30Q9C005 99 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 AUNIPQ9H7T9 357 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TBC1D17Q9HA65 648 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 SPHK2Q9NRA0 654 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 GALPQ9UBC7 116 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 ST3GAL5Q9UNP4 418 aa8.78□□□□□ -1
CLIP1-214ENST00000540539 IGKV6-21A0A0C4DH24 114 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 KANTRA0A1W2PQU2 76 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 MOXD2PA6NHM9 499 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 SNRPGP15A8MWD9 76 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 SYT5O00445 386 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 RAB36O95755 333 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 TXNDC12O95881 172 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 GAAP10253 952 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 TNFRSF1BP20333 461 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 S1PR1P21453 382 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 MTNR1BP49286 362 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 LMAN2Q12907 356 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 PNLIPRP3Q17RR3 467 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 PDZD11Q5EBL8 140 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 GFI1BQ5VTD9 330 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 IL27RAQ6UWB1 636 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 SLC30A8Q8IWU4 369 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 SDR9C7Q8NEX9 313 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 OR10AD1Q8NGE0 317 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 DPH2Q9BQC3 489 aaPredicted RBP8.77□□□□□ -1
CLIP1-214ENST00000540539 POLR3FQ9H1D9 316 aaPredicted RBP8.77□□□□□ -1
CLIP1-214ENST00000540539 GSX1Q9H4S2 264 aaPredicted RBP8.77□□□□□ -1
CLIP1-214ENST00000540539 CLMPQ9H6B4 373 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 TUBA4BQ9H853 241 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 GPN1Q9HCN4 374 aaPredicted RBP8.77□□□□□ -1
CLIP1-214ENST00000540539 PRM3Q9NNZ6 103 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 MAN2C1Q9NTJ4 1040 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 TDP1Q9NUW8 608 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 ZSCAN32Q9NX65 697 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 PCTPQ9UKL6 214 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 RPH3ALQ9UNE2 315 aa8.77□□□□□ -1
CLIP1-214ENST00000540539 TRAV14DV4A0A0A6YYC5 116 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 CDRT15L2A8MXV6 281 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 PRRT4C9JH25 899 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 RPL36A-HNRNPH2H7BZ11 118 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 M0R143 59 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 BCL2L11O43521 198 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 RGS14O43566 566 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 METTL15P1P0C7V9 234 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 PRPS2P11908 318 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 ARF4P18085 180 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-214ENST00000540539 MC3RP41968 323 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 CNTN1Q12860 1018 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 SLC10A1Q14973 349 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF620Q6ZNG0 422 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 SERPINA11Q86U17 422 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF546Q86UE3 836 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 HJURPQ8NCD3 748 aaPredicted RBP8.77□□□□□ -1.01
CLIP1-214ENST00000540539 OR52B6Q8NGF0 335 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 ESAMQ96AP7 390 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 RNFT2Q96EX2 444 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 CLUHP3Q96NS8 147 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 OR52A5Q9H2C5 316 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 TMPRSS4Q9NRS4 437 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 LANCL2Q9NS86 450 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 RCE1Q9Y256 329 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 RASD1Q9Y272 281 aa8.77□□□□□ -1.01
CLIP1-214ENST00000540539 A0A0D9SG52 128 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 TMEM229AB2RXF0 380 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 IDSB3KWA1 339 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 E7EQ34 232 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 LRRN3E7EW58 273 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 OR7A17O14581 309 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 RFXANKO14593 260 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 GOSR2O14653 212 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 TP53I11O14683 189 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 TCF21O43680 179 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 CTNSO60931 367 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 RDH16O75452 317 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF821O75541 412 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-214ENST00000540539 GLCEO94923 617 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 UBL3O95164 117 aa8.76□□□□□ -1.01
CLIP1-214ENST00000540539 KCNK5O95279 499 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms