RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CD80P33681 288 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 TAS2R19P59542 299 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 GMFBP60983 142 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 TIGITQ495A1 244 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 PARP10Q53GL7 1025 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 RAB12Q6IQ22 244 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 NIPAL3Q6P499 406 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 C6orf89Q6UWU4 347 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 ERASQ7Z444 233 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 LHFPL4Q7Z7J7 247 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 HDDC3Q8N4P3 179 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 ZNF709Q8N972 641 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 OR51G2Q8NGK0 314 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 OR52B4Q8NGK2 314 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 OR6X1Q8NH79 312 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 PAQR8Q8TEZ7 354 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 RPUSD4Q96CM3 377 aaKnown RBP2.32□□□□□ -2.04
CCDC7-209ENST00000539197 OR2M2Q96R28 347 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 KCNA7Q96RP8 456 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 SPIN2AQ99865 258 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 SPIN2BQ9BPZ2 258 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 ZNF2Q9BSG1 426 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-209ENST00000539197 SCN2AQ99250 2005 aa2.32□□□□□ -2.04
CCDC7-209ENST00000539197 IGHV3OR16-13A0A075B7E8 117 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 PPIAL4CA0A0B4J2A2 164 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 CLDN5O00501 218 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 F10P00742 488 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 IGKV1D-16P01601 117 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 OPN1LWP04000 364 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 PPIAL4GP0DN37 164 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 IL10P22301 178 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 YWHABP31946 246 aaKnown RBP2.31□□□□□ -2.04
CCDC7-209ENST00000539197 NRF1Q16656 503 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 SLC10A5Q5PT55 438 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 CASC10Q5T4H9 136 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 ACOT7LQ6ZUV0 252 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 DPY19L4Q7Z388 723 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 TPRA1Q86W33 373 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 GCNT2Q8N0V5 402 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 DUSP18Q8NEJ0 188 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 OR8H1Q8NGG4 311 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 OR51S1Q8NGJ8 323 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 TMEM158Q8WZ71 300 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 FAM111AQ96PZ2 611 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 KCNK16Q96T55 309 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 HIST1H4GQ99525 98 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 KLHDC3Q9BQ90 382 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 RHOJQ9H4E5 214 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 ECT2Q9H8V3 914 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 NGBQ9NPG2 151 aa2.31□□□□□ -2.04
CCDC7-209ENST00000539197 C6orf203Q9P0P8 240 aaPredicted RBP2.31□□□□□ -2.04
CCDC7-209ENST00000539197 IGHV2-70DA0A0C4DH43 119 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 A0A0U1RQV5 110 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 GSAPA4D1B5 854 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 HIP1O00291 1037 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 PRKYO43930 277 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 OR10H3O60404 316 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 RBBP9O75884 186 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 RETP07949 1114 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 ATP6V1B2P21281 511 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 PRKXP51817 358 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 NUCB2P80303 420 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 CEBPEQ15744 281 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 SLC5A12Q1EHB4 618 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 C5orf47Q569G3 176 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 C12orf60Q5U649 245 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 GDPD3Q7L5L3 318 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 CATSPER4Q7RTX7 472 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 SVOPLQ8N434 492 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 MRPL43Q8N983 215 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 SELENOMQ8WWX9 145 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 MRPS31Q92665 395 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 RPL3LQ92901 407 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 TSG101Q99816 390 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 NXF5Q9H1B4 397 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 SMYD3Q9H7B4 428 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 EML4Q9HC35 981 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 NUDT15Q9NV35 164 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 RBAKQ9NYW8 714 aaPredicted RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 HOOK1Q9UJC3 728 aaKnown RBP2.3□□□□□ -2.04
CCDC7-209ENST00000539197 V9GY05 133 aa2.3□□□□□ -2.04
CCDC7-209ENST00000539197 CLSPNQ9HAW4 1339 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 A0A0G2JRQ6 117 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 A0A1B0GUL7 405 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 C17orf51A8MQB3 221 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 MSH4O15457 936 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 OR4F21O95013 312 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 IGF1P05019 195 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 RBMY1CP0DJD4 496 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 ICAM2P13598 275 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 CRISP2P16562 243 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 DNAJB1P25685 340 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 ADRA1AP35348 466 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 LEPP41159 167 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 BIDP55957 195 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 STARD6P59095 220 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 RIPK1Q13546 671 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 CHRFAM7AQ494W8 412 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 LINC01620Q4KN68 170 aa2.29□□□□□ -2.04
CCDC7-209ENST00000539197 ACP7Q6ZNF0 438 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms