RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ACP6Q9NPH0 428 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 VNN3Q9NY84 501 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 TMOD2Q9NZR1 351 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KLK13Q9UKR3 277 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PROCRQ9UNN8 238 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PIGLQ9Y2B2 252 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF175Q9Y473 711 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PCDHGB1Q9Y5G3 927 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NPTNQ9Y639 398 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PLB1Q6P1J6 1458 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NEURL4Q96JN8 1562 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 TARBP1Q13395 1621 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ADCY10Q96PN6 1610 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 UBR2Q8IWV8 1755 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 A0A1B0GU03 582 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 LINC00854A0A1B0GVQ3 168 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RPL37AP8A6NKH3 93 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 VSTM2BA6NLU5 285 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR5K4A6NMS3 321 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 E7ESA3 106 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 UNC13BO14795 1591 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SNAP91O60641 907 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 E2F6O75461 281 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 UPK3AO75631 287 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SURF6O75683 361 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ECDO95905 644 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 IGHV3-9P01782 118 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CRYAAP02489 173 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SHC1P29353 583 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RGS4P49798 205 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PAX9P55771 341 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF85Q03923 595 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 DMTNQ08495 405 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CUL2Q13617 745 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SLC17A1Q14916 467 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 QPRTQ15274 297 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SF3A2Q15428 464 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MICAQ29983 383 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC57Q2TAC2 916 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HKDC1Q2TB90 917 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MOGAT2Q3SYC2 334 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GLYR1Q49A26 553 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CCDC152Q4G0S7 254 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SMUG1Q53HV7 270 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 XKR4Q5GH76 650 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MUC21Q5SSG8 566 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 LGSNQ5TDP6 509 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 AADACL4Q5VUY2 407 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ATL3Q6DD88 541 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 PWWP2BQ6NUJ5 590 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 HACD2Q6Y1H2 254 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 Q6ZSR3 168 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CD302Q8IX05 232 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 NAV1Q8NEY1 1877 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR10V1Q8NGI7 309 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR51S1Q8NGJ8 323 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 OR13C5Q8NGS8 318 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 TCTEX1D2Q8WW35 142 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 SLC35B4Q969S0 331 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 C18orf25Q96B23 403 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 KIR2DL4Q99706 377 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 POTEKPQ9BYX7 375 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RWDD1Q9H446 243 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 ZFP14Q9HCL3 533 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 UFSP2Q9NUQ7 469 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 EURLQ9NYK6 297 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 GPR83Q9NYM4 423 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 CD300AQ9UGN4 299 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 FBXO7Q9Y3I1 522 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 MRPS18BQ9Y676 258 aaKnown RBP0.82□□□□□ -2.28
HIF1A-204ENST00000539097 FOCADQ5VW36 1801 aa0.82□□□□□ -2.28
HIF1A-204ENST00000539097 RAD50Q92878 1312 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 IGLV1-50A0A075B6I6 118 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 KCNE1BA0A087WTH5 132 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 A0A0G2JLM5 398 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 TTC26A0AVF1 554 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ANKRD30BLA7E2S9 258 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MGRN1O60291 552 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 RANBP6O60518 1105 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CISD3P0C7P0 127 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 EPB41P11171 864 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CPA3P15088 417 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 GNSP15586 552 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SRMP19623 302 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HNRNPH3P31942 346 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SAA4P35542 130 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 MAGEA5P43359 124 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 XCR1P46094 333 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 HTR5AP47898 357 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CSNK1DP48730 415 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 CCT3P49368 545 aaKnown RBP0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ENPEPQ07075 957 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 GRB7Q14451 532 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZNF146Q15072 292 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 ZMYND11Q15326 602 aa0.81□□□□□ -2.28
HIF1A-204ENST00000539097 SIX1Q15475 284 aaPredicted RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms