RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PCDHGB2Q9Y5G2 931 aa12.86□□□□□ -0.35
LIMK1-208ENST00000538333 A0A1W2PPC1 479 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 A0A1W2PQ09 198 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 RHPN2P1A8MT19 583 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 MCIDASD6RGH6 385 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 E9PI62 339 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 POLR1CO15160 346 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 SEC14L5O43304 696 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 RGS9O75916 674 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 NCR1O76036 304 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 IFNGP01579 166 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 HIST1H1CP16403 213 aaKnown RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 ADH7P40394 386 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 RFX2P48378 723 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 EIF2B2P49770 351 aaKnown RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 SELENBP1Q13228 472 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 NRARPQ7Z6K4 114 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 ZBTB8BQ8NAP8 495 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 IL17RDQ8NFM7 739 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 SMPDL3BQ92485 455 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 ERMAPQ96PL5 475 aaPredicted RBP12.85□□□□□ -0.35
LIMK1-208ENST00000538333 LRRN3Q9H3W5 708 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 ASXL3Q9C0F0 2248 aa12.85□□□□□ -0.35
LIMK1-208ENST00000538333 IGKV3D-11A0A0A0MRZ8 115 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 PLPP2O43688 288 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR2B3O76000 313 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 MT-ND5P03915 603 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CSF3P09919 207 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CD53P19397 219 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR1D4P47884 311 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CSNK1EP49674 416 aaKnown RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 STARD6P59095 220 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 PPP3R1P63098 170 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CFHR1Q03591 330 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CD226Q15762 336 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 FAAH2Q6GMR7 532 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 TTLL10Q6ZVT0 673 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 NR2C2APQ86WQ0 139 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 GPALPP1Q8IXQ4 340 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 ZNF440Q8IYI8 595 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 GDPD1Q8N9F7 314 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 NLGN4YQ8NFZ3 816 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR52E2Q8NGJ4 325 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR5W2Q8NH69 310 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 SMAP2Q8WU79 429 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR1F2PQ96R84 312 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 NDC1Q9BTX1 674 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 ERVMER34-1Q9H9K5 563 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 IGHV1OR21-1A0A087WYE8 117 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 IL33O95760 270 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 IGKV3-11P04433 115 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 PPICP45877 212 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 EFNA3P52797 238 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR1D5P58170 312 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 RPS4XP62701 263 aaKnown RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 POU4F2Q12837 409 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CBX3Q13185 183 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 SSX6Q7RTT6 188 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OR4K13Q8NH42 304 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 OIT3Q8WWZ8 545 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 TSLPQ969D9 159 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 MVB12AQ96EY5 273 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 C4orf36Q96KX1 117 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 NXF5Q9H1B4 397 aaKnown RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 PPIL3Q9H2H8 161 aaKnown RBP12.84□□□□□ -0.35
LIMK1-208ENST00000538333 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 UBQLN4Q9NRR5 601 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 COMMD3Q9UBI1 195 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 FER1L5A0AVI2 2057 aa12.84□□□□□ -0.35
LIMK1-208ENST00000538333 TMEM150CB9EJG8 249 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 OIP5O43482 229 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 PPM1BO75688 479 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 CFL1P23528 166 aaKnown RBP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 MTNR1BP49286 362 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 TPTEP56180 551 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 OR12D2P58182 307 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ACTC1P68032 377 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 ACTA1P68133 377 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 HSD11B2P80365 405 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 E2F1Q01094 437 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SKP2Q13309 424 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 CARTPTQ16568 116 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 APOOLQ6UXV4 268 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 VASH1Q7L8A9 365 aaPredicted RBP12.83□□□□□ -0.36
LIMK1-208ENST00000538333 CARFQ8N187 725 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 PGLYRP3Q96LB9 341 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SLC46A1Q96NT5 459 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 NEDD4LQ96PU5 975 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 DDOQ99489 341 aa12.83□□□□□ -0.36
LIMK1-208ENST00000538333 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms